Ss1.1-rute2130b_a18.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| TCCAAGTCTGATATTAAGGAGTCAAGAAGACATCTCTTTACACCTGCTGATAAGAGAATC CCTAGAATTCGGATAGAAACCAGACAGGCCTCTACATTAGAAGGACGGAGAATTATTGTT TCCATTGATGGTTGGCCCAGAAATTCCAGATATCCAAATGGACACTTTGTAAAAAATTTA GGCGAAGTTGGAGACAAAGAGACGGAAACGGAAGTTTTGTTACTTGAGCATGATGTTCCC CATCAGCCCTTTTCACAGGCTGTTCTTAGCTTCTTACCGAAGATGCCCTGGAGCATTACG GAGAAGGACATGAAAAACCGAGAAGACCTGAGACATCTCTGTGTTTGCAGTGTGGACCCC CCAGGATGTACTGACATAGATGATGCTCTCCATTGCAGAGAGCTTGAAAATGGAGATTTG GAGGTTGGTGTTCACATTGCTGATGTTAGCCACTTTATTAGGCCAGGAAATGCTTTGGAT CAAGAATCAGCTAGAAGGGGAACAACAGTGTATCTTTGTGAAAAGAGGATTGACATGGTT CCAGAGTTGCTTAGCTCTAACTTATGTTCCCTGAGATCTAACGTTGACAGGTTAGCATTT TCGTGTATTTGGGAGATGAATCACAATGCTGAAATCTTAAAAACGAGGTTTACCAAAAGT GTCATTAATTCAAAGGCTTCCCTTACATATGCTGAAGCTCAGATGAGAATTGATTCTGCA GCCATGAATGATAGTATTACTACT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| TCCAAGTCTGATATTAAGGAGTCAAGAAGACATCTCTTTACACCTGCTGATAAGAGAATC CCTAGAATTCGGATAGAAACCAGACAGGCCTCTACATTAGAAGGACGGAGAATTATTGTT TCCATTGATGGTTGGCCCAGAAATTCCAGATATCCAAATGGACACTTTGTAAAAAATTTA GGCGAAGTTGGAGACAAAGAGACGGAAACGGAAGTTTTGTTACTTGAGCATGATGTTCCC CATCAGCCCTTTTCACAGGCTGTTCTTAGCTTCTTACCGAAGATGCCCTGGAGCATTACG GAGAAGGACATGAAAAACCGAGAAGACCTGAGACATCTCTGTGTTTGCAGTGTGGACCCC CCAGGATGTACTGACATAGATGATGCTCTCCATTGCAGAGAGCTTGAAAATGGAGATTTG GAGGTTGGTGTTCACATTGCTGATGTTAGCCACTTTATTAGGCCAGGAAATGCTTTGGAT CAAGAATCAGCTAGAAGGGGAACAACAGTGTATCTTTGTGAAAAGAGGATTGACATGGTT CCAGAGTTGCTTAGCTCTAACTTATGTTCCCTGAGATCTAACGTTGACAGGTTAGCATTT TCGTGTATTTGGGAGATGAATCACAATGCTGAAATCTTAAAAACGAGGTTTACCAAAAGT GTCATTAATTCAAAGGCTTCCCTTACATATGCTGAAGCTCAGATGAGAATTGATTCTGCA GCCATGAATGATAGTATTACTACT |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 21 entry(ies) | More info |
| Aligned organism(s): 21 entry(ies) | Help | Less info |
| 20-180, gnl|bosTau2|chr12 (21754529-21754691) | |
| 20-180, gnl|Hg17|chr13 (72245962-72245800) | |
| 20-180, gnl|Mm7|chr14 (93490158-93489996) | |
| 305-425, gnl|bosTau2|chr12 (21755760-21755880) | |
| 305-425, gnl|canFam2|chr22 (29870824-29870904) | |
| 305-425, gnl|danRer3|chr17 (35119039-35118964) | |
| 305-425, gnl|dasNov1|scaffold_10376 (11079-11159) | |
| 305-425, gnl|echTel1|scaffold_312503 (93322-93402) | |
| 305-425, gnl|fr1|chrUn (135893809-135893735) | |
| 305-425, gnl|galGal2|chr1 (152910805-152910732) | |
| 305-425, gnl|hg17|chr13 (72244290-72244370) | |
| 305-425, gnl|Hg17|chr13 (72244416-72244296) | |
| 305-425, gnl|mm7|chr14 (93488127-93488207) | |
| 305-425, gnl|Mm7|chr14 (93488253-93488133) | |
| 305-425, gnl|monDom2|scaffold_8 (9029946-9030026) | |
| 305-425, gnl|oryCun1|scaffold_172484 (75661-75741) | |
| 305-425, gnl|panTro1|chr14 (54789225-54789305) | |
| 305-425, gnl|rheMac2|chr17 (53221770-53221850) | |
| 305-425, gnl|rn3|chr15 (82882653-82882733) | |
| 305-425, gnl|tetNig1|chrUn_random (10007080-10007160) | |
| 305-425, gnl|xenTro1|scaffold_107 (836199-836124) |
| Aligned organism(s): 21 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 20-180, gnl|bosTau2|chr12 (21754529-21754691) | |
| 20-180, gnl|Hg17|chr13 (72245962-72245800) | |
| 20-180, gnl|Mm7|chr14 (93490158-93489996) | |
| 305-425, gnl|bosTau2|chr12 (21755760-21755880) | |
| 305-425, gnl|canFam2|chr22 (29870824-29870904) | |
| 305-425, gnl|danRer3|chr17 (35119039-35118964) | |
| 305-425, gnl|dasNov1|scaffold_10376 (11079-11159) | |
| 305-425, gnl|echTel1|scaffold_312503 (93322-93402) | |
| 305-425, gnl|fr1|chrUn (135893809-135893735) | |
| 305-425, gnl|galGal2|chr1 (152910805-152910732) | |
| 305-425, gnl|hg17|chr13 (72244290-72244370) | |
| 305-425, gnl|Hg17|chr13 (72244416-72244296) | |
| 305-425, gnl|mm7|chr14 (93488127-93488207) | |
| 305-425, gnl|Mm7|chr14 (93488253-93488133) | |
| 305-425, gnl|monDom2|scaffold_8 (9029946-9030026) | |
| 305-425, gnl|oryCun1|scaffold_172484 (75661-75741) | |
| 305-425, gnl|panTro1|chr14 (54789225-54789305) | |
| 305-425, gnl|rheMac2|chr17 (53221770-53221850) | |
| 305-425, gnl|rn3|chr15 (82882653-82882733) | |
| 305-425, gnl|tetNig1|chrUn_random (10007080-10007160) | |
| 305-425, gnl|xenTro1|scaffold_107 (836199-836124) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| ute (0.132784) |