Non-Coding RNA Search

Ss1.1-rute2131b_i20.5

Sequence:


               
               TCACCCCTCGCATCGTCCTCGTGCGTGCGGACAGCGTAGGGCTGGAGGGGGGGGTTGCTT
GGGGTTTTTTCTCTTGATTCTTTCTCCGAGGTGGGATATTGACCAGAATTGCTCTGTAGA
TGCTTGGAACTGGACGGAAAGACTTCGGAATAGCGGCGGGGGGTCGGGGCGGGGACACCC
ACAACCAAACCGACGTGCTGTTTCTGGTCCTGTTTTTATTTTCAAAAACCGACACACTCG
ACAGTAGAGCCTGTCCCCTCCCAGGAGGGGTGACTCGTGGCCGCCGTCACCTCACCACCC
CCCATCGGAACCTCTGTGTCTGGCCCTGAAGACACCCCAATTCTTTGT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TCACCCCTCGCATCGTCCTCGTGCGTGCGGACAGCGTAGGGCTGGAGGGGGGGGTTGCTT
GGGGTTTTTTCTCTTGATTCTTTCTCCGAGGTGGGATATTGACCAGAATTGCTCTGTAGA
TGCTTGGAACTGGACGGAAAGACTTCGGAATAGCGGCGGGGGGTCGGGGCGGGGACACCC
ACAACCAAACCGACGTGCTGTTTCTGGTCCTGTTTTTATTTTCAAAAACCGACACACTCG
ACAGTAGAGCCTGTCCCCTCCCAGGAGGGGTGACTCGTGGCCGCCGTCACCTCACCACCC
CCCATCGGAACCTCTGTGTCTGGCCCTGAAGACACCCCAATTCTTTGT

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

Help | Less info


               
               5-348, gnl|bosTau2|chr3 (60873469-60873816)
               

               
               5-348, gnl|Hg17|chr1 (54403751-54403404)
               

               
               5-348, gnl|Mm7|chr4 (106425527-106425855)

Aligned organism(s): 3 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               5-348, gnl|bosTau2|chr3 (60873469-60873816)
               

               
               5-348, gnl|Hg17|chr1 (54403751-54403404)
               

               
               5-348, gnl|Mm7|chr4 (106425527-106425855)

Expressed library(ies): 5 entry(ies)

More info

Expressed library(ies): 5 entry(ies)

Help | Less info


               
               ill (0.351185)
               

               
               ece (0.229305)
               

               
               pty (0.142714)
               

               
               ute (0.132784)
               

               
               ebs (0.118301)

Expressed library(ies): 5 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ill (0.351185)
               

               
               ece (0.229305)
               

               
               pty (0.142714)
               

               
               ute (0.132784)
               

               
               ebs (0.118301)

	5-348, gnl\|bosTau2\|chr3 (60873469-60873816)
	5-348, gnl\|Hg17\|chr1 (54403751-54403404)
	5-348, gnl\|Mm7\|chr4 (106425527-106425855)

	ill (0.351185)
	ece (0.229305)
	pty (0.142714)
	ute (0.132784)
	ebs (0.118301)