Non-Coding RNA Search

Ss1.1-rvin015_o6.5

Sequence:


               
               GGACATGTGAGTAGATTGTCATATTGGGCTGAATTGTAGGAATATGATTAACTCAAAATA
GCTTACCAACTTTGCATACCTGATAAAGTGTTCAGACTGCTTCTTAAGTGTATAATATTA
AAATTTTGTGACCATATATAAAAATATTAATAGGCAGTGGACAGATACTAAAAAAAGTGG
ATATAACCTAAATTACCTAGAAATGAGTAGTATTTCAGAGCCGTTAGAAGTAAAAATGTT
TCATTCAATAATTTAACTTTTAGACTATTATTCCTAATTAGGGATTTGATTAGATTGTGG
GCATTTAATTGGAGAGTATTTAGTCTCAAGAGGAAAAACTGCCTGGTTTCCGTGTAAAAC
AGTGGGCTTTTTCCACCATGTTGTTTTTTAAATGCATATTCACAGATAACAGTATTAGTC
CTACATTCAATCTGTAAATAACTTATGAGAAAATTGTTCAGTGGAAACAAGTGAAAGGAT
GACATTCTTTTGCAGATAAAAATATGAACATAGAGAATTTTTTCTATTAAAAATACTTCA
TACATTCAGTAGTTTTAAAGTAAATCTACAGGTATGTATTTATGTGTGTGTTCGACATGA
AATAGCCCTCTGGGTTTGACTCTGATGTTTTATATTTTTAAAAACTACCATGTGCTTGCA
GAAATTTACCGAGAAGCTGTTATAAAGATGCAGTGGAGCATGGCCAGGTAACTAAAAACA
TTATTGATATTTGCAAATATATAGACTTTATTGTTGTACTGTAAGCTGCAAGGACACTAA
GTATTGGCTATTGAAAAAATATTACATTTGCATTTCATGGCAAATATAATGTTATACTGC
TTGGTTAGTCTAATATATTTCTAATATTTTGTGCTTTCATATCCCAAAGGAAACACTATA
TGTGAAGATATTTTGAAATACTATGAAGTGATATATAATTATGTGATA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGACATGTGAGTAGATTGTCATATTGGGCTGAATTGTAGGAATATGATTAACTCAAAATA
GCTTACCAACTTTGCATACCTGATAAAGTGTTCAGACTGCTTCTTAAGTGTATAATATTA
AAATTTTGTGACCATATATAAAAATATTAATAGGCAGTGGACAGATACTAAAAAAAGTGG
ATATAACCTAAATTACCTAGAAATGAGTAGTATTTCAGAGCCGTTAGAAGTAAAAATGTT
TCATTCAATAATTTAACTTTTAGACTATTATTCCTAATTAGGGATTTGATTAGATTGTGG
GCATTTAATTGGAGAGTATTTAGTCTCAAGAGGAAAAACTGCCTGGTTTCCGTGTAAAAC
AGTGGGCTTTTTCCACCATGTTGTTTTTTAAATGCATATTCACAGATAACAGTATTAGTC
CTACATTCAATCTGTAAATAACTTATGAGAAAATTGTTCAGTGGAAACAAGTGAAAGGAT
GACATTCTTTTGCAGATAAAAATATGAACATAGAGAATTTTTTCTATTAAAAATACTTCA
TACATTCAGTAGTTTTAAAGTAAATCTACAGGTATGTATTTATGTGTGTGTTCGACATGA
AATAGCCCTCTGGGTTTGACTCTGATGTTTTATATTTTTAAAAACTACCATGTGCTTGCA
GAAATTTACCGAGAAGCTGTTATAAAGATGCAGTGGAGCATGGCCAGGTAACTAAAAACA
TTATTGATATTTGCAAATATATAGACTTTATTGTTGTACTGTAAGCTGCAAGGACACTAA
GTATTGGCTATTGAAAAAATATTACATTTGCATTTCATGGCAAATATAATGTTATACTGC
TTGGTTAGTCTAATATATTTCTAATATTTTGTGCTTTCATATCCCAAAGGAAACACTATA
TGTGAAGATATTTTGAAATACTATGAAGTGATATATAATTATGTGATA

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

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               1-948, gnl|bosTau2|chr9 (1586759-1585820)
               

               
               1-948, gnl|Hg17|chr6 (72070827-72071760)
               

               
               1-948, gnl|Mm7|chr1 (23578306-23577143)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-948, gnl|bosTau2|chr9 (1586759-1585820)
               

               
               1-948, gnl|Hg17|chr6 (72070827-72071760)
               

               
               1-948, gnl|Mm7|chr1 (23578306-23577143)

Expressed library(ies): 3 entry(ies)

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Expressed library(ies): 3 entry(ies)

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               vin (0.332557)
               

               
               tra (0.123092)
               

               
               clu (0.119646)

Expressed library(ies): 3 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               vin (0.332557)
               

               
               tra (0.123092)
               

               
               clu (0.119646)

	1-948, gnl\|bosTau2\|chr9 (1586759-1585820)
	1-948, gnl\|Hg17\|chr6 (72070827-72071760)
	1-948, gnl\|Mm7\|chr1 (23578306-23577143)