Non-Coding RNA Search

Ss1.1-rvin016_k24.5

Sequence:


               
               TGGAAAGTTCCCGAATTCTAATCTTGGTTCCAAGAGCCATTTGGTTTTGGTTGTGACAAT
CCCCATACCAACTGTCTAACCTTCAGCAGAATTCTTGAGGTGACCCTCTGAACATGTGGA
AAGCTTAGAAAGACTTAAGAGCCTCAAAGGGAAACTGCTTTCTCACTCCAAGCATACATC
AGGCCAGTCTGGGCTGCAACAGCAACACCTTAGATTGTTAGAGACAAAGTAGCTATGTTT
GGAGACCTGAAGGAGGAGCATGAGAAGCATACTCAGGGGCCAGCTGAAGTACAGATTACC
CCCCAAAGGGACAGAGGAAATGACTAAATAACTCTACACACAAGAGCACCTACAACATTA
GGAAAGCTATGGCTAAAATGCAGTCTTTAATGACTAATGTAAAATATCCCATATTTTGGA
GGCTTGGAACAGCAGCTTCAATCATATAGAAATAGGACCATAAAGATCTCTACATCCTAA
AGTTTAGCATTCCATGATCTTTGGGTCACATAAACATCGCCCTCTGATTTGTACGCTATT
ATAGAAATTAGCTAATATGGAGATAGTTTTTATTTGCCAGATCTATGCTATACATAAACT
GCTTAGGATTAT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TGGAAAGTTCCCGAATTCTAATCTTGGTTCCAAGAGCCATTTGGTTTTGGTTGTGACAAT
CCCCATACCAACTGTCTAACCTTCAGCAGAATTCTTGAGGTGACCCTCTGAACATGTGGA
AAGCTTAGAAAGACTTAAGAGCCTCAAAGGGAAACTGCTTTCTCACTCCAAGCATACATC
AGGCCAGTCTGGGCTGCAACAGCAACACCTTAGATTGTTAGAGACAAAGTAGCTATGTTT
GGAGACCTGAAGGAGGAGCATGAGAAGCATACTCAGGGGCCAGCTGAAGTACAGATTACC
CCCCAAAGGGACAGAGGAAATGACTAAATAACTCTACACACAAGAGCACCTACAACATTA
GGAAAGCTATGGCTAAAATGCAGTCTTTAATGACTAATGTAAAATATCCCATATTTTGGA
GGCTTGGAACAGCAGCTTCAATCATATAGAAATAGGACCATAAAGATCTCTACATCCTAA
AGTTTAGCATTCCATGATCTTTGGGTCACATAAACATCGCCCTCTGATTTGTACGCTATT
ATAGAAATTAGCTAATATGGAGATAGTTTTTATTTGCCAGATCTATGCTATACATAAACT
GCTTAGGATTAT

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               5-611, gnl|bosTau2|chr9 (11706822-11707457)
               

               
               5-611, gnl|Hg17|chr6 (117716230-117715263)
               

               
               5-611, gnl|Mm7|chr10 (51861006-51860115)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               5-611, gnl|bosTau2|chr9 (11706822-11707457)
               

               
               5-611, gnl|Hg17|chr6 (117716230-117715263)
               

               
               5-611, gnl|Mm7|chr10 (51861006-51860115)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               vin (0.332557)
               

               
               isp (0.150376)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               vin (0.332557)
               

               
               isp (0.150376)

	5-611, gnl\|bosTau2\|chr9 (11706822-11707457)
	5-611, gnl\|Hg17\|chr6 (117716230-117715263)
	5-611, gnl\|Mm7\|chr10 (51861006-51860115)