Ss1.1-rvin025_p21.5
|
GGCGGGCTCGTGGTGAGCAGAAGTCAAGGGATGAAATATAGGTATACCTAGAAGCAGATT
CTCGTGGTGAGCAGAAGTCAAGATCATCTTCTTTCATACTAACTGATAATCATCTTGATT
CACTATGGCACTGGCAGCAGTAAAATGGGTGATATCAAGTAGAACTATCTTGAAACATTT
ATTTCCAATTCAAAACAGCGCTTCATATTGTGTTTGTCATAAATCTACATATTCTTCTCT
TCCAGATGACTATAATTGCAAAGTAGAGCTTGCTTTGACATCTGATGGCAGGACAATAGT
ATGCTATCACCCTTCTGTGGACATTCCATACGAACACACAAAACCTATCCCTCGTCCAGA
TCCTGTACATAATATTGAAGAAACACATGATCTAGTGCTGAAAACCAGATTAGAAGAAAA
AGGTGAACATTTAGAGCAAGGACCCATGATAGAACAACTTAGCAAGATGTTCTTTACTAC
TAAGCACCGTTGGTATCCTCGTGGACAGTATCATAGACGTCGTAGGAAGCCAAATCCTCC
AAAAGACAGATGATACTGAGATTTTCAGAAATCAGAGAGAAATGTTATCCTGCATCTCAT
TTGCCATTTGAGAAAATACAGTTGGGTATATTCACCAATATGTTATATAGTAAAATAATT
AAAAGATCTTATCATAAAAAAAAAAAAAAAAAAAAA
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
GGCGGGCTCGTGGTGAGCAGAAGTCAAGGGATGAAATATAGGTATACCTAGAAGCAGATT
CTCGTGGTGAGCAGAAGTCAAGATCATCTTCTTTCATACTAACTGATAATCATCTTGATT
CACTATGGCACTGGCAGCAGTAAAATGGGTGATATCAAGTAGAACTATCTTGAAACATTT
ATTTCCAATTCAAAACAGCGCTTCATATTGTGTTTGTCATAAATCTACATATTCTTCTCT
TCCAGATGACTATAATTGCAAAGTAGAGCTTGCTTTGACATCTGATGGCAGGACAATAGT
ATGCTATCACCCTTCTGTGGACATTCCATACGAACACACAAAACCTATCCCTCGTCCAGA
TCCTGTACATAATATTGAAGAAACACATGATCTAGTGCTGAAAACCAGATTAGAAGAAAA
AGGTGAACATTTAGAGCAAGGACCCATGATAGAACAACTTAGCAAGATGTTCTTTACTAC
TAAGCACCGTTGGTATCCTCGTGGACAGTATCATAGACGTCGTAGGAAGCCAAATCCTCC
AAAAGACAGATGATACTGAGATTTTCAGAAATCAGAGAGAAATGTTATCCTGCATCTCAT
TTGCCATTTGAGAAAATACAGTTGGGTATATTCACCAATATGTTATATAGTAAAATAATT
AAAAGATCTTATCATAAAAAAAAAAAAAAAAAAAAA
|
|
gi|12052842|emb|CAB66594.1| |
Protein identifier
|
gi|12052842|emb|CAB66594.1| |
|
27-194, gnl|bosTau2|chr5 (15498337-15498176) |
|
27-194, gnl|canFam2|chr15 (36716340-36716503) |
|
27-194, gnl|dasNov1|scaffold_4455 (13667-13498) |
|
27-194, gnl|echTel1|scaffold_282566 (41609-41798) |
|
27-194, gnl|hg17|chr12 (92365431-92365600) |
|
27-194, gnl|Hg17|chr12 (92365434-92365599) |
|
27-194, gnl|loxAfr1|scaffold_88273 (966-1134) |
|
27-194, gnl|mm7|chr10 (95061514-95061369) |
|
27-194, gnl|Mm7|chr10 (95061509-95061368) |
|
27-194, gnl|oryCun1|scaffold_174952 (4875-4693) |
|
27-194, gnl|panTro1|chr10 (94537473-94537642) |
|
27-194, gnl|rheMac2|chr11 (94695385-94695554) |
|
27-194, gnl|rn3|chr7 (32726013-32725863) |
| |
|
205-696, gnl|bosTau2|chr4 (44624351-44624868) |
|
205-696, gnl|Hg17|chr7 (46839300-46838797) |
| |
|
344-690, gnl|bosTau2|chr19 (30480954-30481302) |
|
344-690, gnl|Hg17|chr6 (16280035-16280372) |
|
344-690, gnl|Mm7|chr11 (70842147-70842487) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
27-194, gnl|bosTau2|chr5 (15498337-15498176) |
|
27-194, gnl|canFam2|chr15 (36716340-36716503) |
|
27-194, gnl|dasNov1|scaffold_4455 (13667-13498) |
|
27-194, gnl|echTel1|scaffold_282566 (41609-41798) |
|
27-194, gnl|hg17|chr12 (92365431-92365600) |
|
27-194, gnl|Hg17|chr12 (92365434-92365599) |
|
27-194, gnl|loxAfr1|scaffold_88273 (966-1134) |
|
27-194, gnl|mm7|chr10 (95061514-95061369) |
|
27-194, gnl|Mm7|chr10 (95061509-95061368) |
|
27-194, gnl|oryCun1|scaffold_174952 (4875-4693) |
|
27-194, gnl|panTro1|chr10 (94537473-94537642) |
|
27-194, gnl|rheMac2|chr11 (94695385-94695554) |
|
27-194, gnl|rn3|chr7 (32726013-32725863) |
| |
|
205-696, gnl|bosTau2|chr4 (44624351-44624868) |
|
205-696, gnl|Hg17|chr7 (46839300-46838797) |
| |
|
344-690, gnl|bosTau2|chr19 (30480954-30481302) |
|
344-690, gnl|Hg17|chr6 (16280035-16280372) |
|
344-690, gnl|Mm7|chr11 (70842147-70842487) |
|
isp (1.95489) |
|
bfe (1.34872) |
|
mgm (1.08206) |
|
sme (0.91631) |
|
tes (0.831255) |
|
fco (0.78604) |
|
mgp (0.692042) |
|
lyg (0.665513) |
|
ski (0.586941) |
|
aor (0.585823) |
|
sin (0.524843) |
|
thg (0.507164) |
|
mga (0.480615) |
|
hea (0.408998) |
|
ste (0.405625) |
|
ova (0.387397) |
|
ret (0.3862) |
|
tra (0.369276) |
|
gul (0.355177) |
|
rec (0.346141) |
|
vin (0.332557) |
|
nco (0.323468) |
|
ldo (0.291008) |
|
ssp (0.271039) |
|
pla (0.267344) |
|
cbe (0.239234) |
|
spc (0.226732) |
|
col (0.195008) |
|
sag (0.182715) |
|
sto (0.179824) |
|
eye (0.170503) |
|
csp (0.161186) |
|
tbr (0.154178) |
|
lin (0.145603) |
|
cst (0.140036) |
|
kid (0.129735) |
|
sug (0.127291) |
|
pgl (0.118483) |
|
jca (0.11396) |
|
isp (1.95489) |
|
bfe (1.34872) |
|
mgm (1.08206) |
|
sme (0.91631) |
|
tes (0.831255) |
|
fco (0.78604) |
|
mgp (0.692042) |
|
lyg (0.665513) |
|
ski (0.586941) |
|
aor (0.585823) |
|
sin (0.524843) |
|
thg (0.507164) |
|
mga (0.480615) |
|
hea (0.408998) |
|
ste (0.405625) |
|
ova (0.387397) |
|
ret (0.3862) |
|
tra (0.369276) |
|
gul (0.355177) |
|
rec (0.346141) |
|
vin (0.332557) |
|
nco (0.323468) |
|
ldo (0.291008) |
|
ssp (0.271039) |
|
pla (0.267344) |
|
cbe (0.239234) |
|
spc (0.226732) |
|
col (0.195008) |
|
sag (0.182715) |
|
sto (0.179824) |
|
eye (0.170503) |
|
csp (0.161186) |
|
tbr (0.154178) |
|
lin (0.145603) |
|
cst (0.140036) |
|
kid (0.129735) |
|
sug (0.127291) |
|
pgl (0.118483) |
|
jca (0.11396) |
