Non-Coding RNA Search

Ss1.1-rvin027_o8.5

Sequence:


               
               GGAAGGTCTCTCTCTTACTGTAAATATCGTGAACAGTATGTACCTTCACATCCACGGGAA
GAATGTGGCCACACCCCTCCCAGTGAGACGCCGAGTCCTTGGAGTGAATGAATGCCGCCT
GAGTTAGTTTCACTGTCTCTTGACTGGATGTGTCACAAGCAACTTTTACGTCCTGAAGCA
CTTTGCCCTGTTTCCAACATTGGAGTAGATACTGTATACCGGACACTATTGAATTGCTGT
AAAAATAGGATGATGAGTTTTTGTTTTAGTTTTTCATGAAATCGAACCTTTGGTTGACAC
CATTTTTTGGCTGTTGGCATCAGTATAGAAACCGACTGGCAGCTTTTCTTGACGAGCTCT
TTGACACATGGACACCATTTCATGTCTACAGCTGTTTGTGGGATGTGGGGAAAAAAAAAA
AAAGTGAAGCTTCAAAATTGAAAAACTAAATTTCAGAAATTAAAATCGAACAAAAATAGC
CTTTCTGTTCAGATGGTTTTCAAACCGATTGTTAAGAAAGAGATGAACAAAATCATAATG
CATCTTGGGTGGGACATATTTCAAACTTCTGCCTTATATTGTACAATACAGCTAGAGAAT
TATAGTTCACTATGGCCATTCGCTACATAAACAACATTAAAATGAAATATTCCTCGTAAA
AAAAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGAAGGTCTCTCTCTTACTGTAAATATCGTGAACAGTATGTACCTTCACATCCACGGGAA
GAATGTGGCCACACCCCTCCCAGTGAGACGCCGAGTCCTTGGAGTGAATGAATGCCGCCT
GAGTTAGTTTCACTGTCTCTTGACTGGATGTGTCACAAGCAACTTTTACGTCCTGAAGCA
CTTTGCCCTGTTTCCAACATTGGAGTAGATACTGTATACCGGACACTATTGAATTGCTGT
AAAAATAGGATGATGAGTTTTTGTTTTAGTTTTTCATGAAATCGAACCTTTGGTTGACAC
CATTTTTTGGCTGTTGGCATCAGTATAGAAACCGACTGGCAGCTTTTCTTGACGAGCTCT
TTGACACATGGACACCATTTCATGTCTACAGCTGTTTGTGGGATGTGGGGAAAAAAAAAA
AAAGTGAAGCTTCAAAATTGAAAAACTAAATTTCAGAAATTAAAATCGAACAAAAATAGC
CTTTCTGTTCAGATGGTTTTCAAACCGATTGTTAAGAAAGAGATGAACAAAATCATAATG
CATCTTGGGTGGGACATATTTCAAACTTCTGCCTTATATTGTACAATACAGCTAGAGAAT
TATAGTTCACTATGGCCATTCGCTACATAAACAACATTAAAATGAAATATTCCTCGTAAA
AAAAAAAAAAAA

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

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               47-659, gnl|bosTau2|chr6 (31646124-31645527)
               

               
               47-659, gnl|Hg17|chr4 (40658750-40658156)
               

               
               47-659, gnl|Mm7|chr5 (65657795-65657222)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               47-659, gnl|bosTau2|chr6 (31646124-31645527)
               

               
               47-659, gnl|Hg17|chr4 (40658750-40658156)
               

               
               47-659, gnl|Mm7|chr5 (65657795-65657222)

Expressed library(ies): 3 entry(ies)

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Expressed library(ies): 3 entry(ies)

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               vin (0.332557)
               

               
               isp (0.300752)
               

               
               spc (0.113366)

Expressed library(ies): 3 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               vin (0.332557)
               

               
               isp (0.300752)
               

               
               spc (0.113366)

	47-659, gnl\|bosTau2\|chr6 (31646124-31645527)
	47-659, gnl\|Hg17\|chr4 (40658750-40658156)
	47-659, gnl\|Mm7\|chr5 (65657795-65657222)