Non-Coding RNA Search

Ss1.1-uFN-UNL-P-FN-au-b-09-0-UNL.s1.3

Sequence:


               
               GCGGCCGCTCGCGATCTAGAACTAGTAAATGAATACTTTGGAGAAATGAGATATGTTGTA
GTTTTTTGGAAAATACACTAAGGAGAAGGAATAAATGTGAATCTCACTGCGTTGTAGGAG
GTTGAAGTCTAAGGAGATCCCACTGCAACCTGCTGCTGAACGATTACATTCTCCTTAAGC
AGAAATCGTTGGATGTGCCACGCAATGATGTCTGTTTATGAGTTATTTGCTCTTTGATAA
AAAAAAAAAGACCCCCAGCAATAAAAACGGGGTCTCTCTCTTGCCCTCTGTGCACCTTAG
TCTCTTGTATTCAACTTTGCTGGTTCTCTGGAATTTTCCTACTTTTTAGCATAATTTTGA
TGATTGAAAACTATTTTGGAGAGGATGGGTCAGGTGCTTTGTCCCCATTGTCTTTTGAAG
TGCCTGCATATGAACAAGTAACAGTTCTGTAAAAAAGGACACCCATTCCACTTTTCAAGT
GTGCTTTGTTTTAAGCCATAAAGACACAGGTATACTTTTGTCACATTCTACTAGCCAGAA
TTTTTGAGGCGAGTTAAGACACAAAGATCGGCTAGNAAGATTAATTNTGTTGTTCAAATN
TNATATTCATCTTTCATNTCTGAAATTGTTACTTACTTATTCCTTCCATGCTACCCCCTC
TTTTTGTCTTTAAGTGTGTGCCTCTGGGCATGCTTA------------TGTCTCAAGGTN
------------TGTNATTAAAGTAAATAAATCAGC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GCGGCCGCTCGCGATCTAGAACTAGTAAATGAATACTTTGGAGAAATGAGATATGTTGTA
GTTTTTTGGAAAATACACTAAGGAGAAGGAATAAATGTGAATCTCACTGCGTTGTAGGAG
GTTGAAGTCTAAGGAGATCCCACTGCAACCTGCTGCTGAACGATTACATTCTCCTTAAGC
AGAAATCGTTGGATGTGCCACGCAATGATGTCTGTTTATGAGTTATTTGCTCTTTGATAA
AAAAAAAAAGACCCCCAGCAATAAAAACGGGGTCTCTCTCTTGCCCTCTGTGCACCTTAG
TCTCTTGTATTCAACTTTGCTGGTTCTCTGGAATTTTCCTACTTTTTAGCATAATTTTGA
TGATTGAAAACTATTTTGGAGAGGATGGGTCAGGTGCTTTGTCCCCATTGTCTTTTGAAG
TGCCTGCATATGAACAAGTAACAGTTCTGTAAAAAAGGACACCCATTCCACTTTTCAAGT
GTGCTTTGTTTTAAGCCATAAAGACACAGGTATACTTTTGTCACATTCTACTAGCCAGAA
TTTTTGAGGCGAGTTAAGACACAAAGATCGGCTAGNAAGATTAATTNTGTTGTTCAAATN
TNATATTCATCTTTCATNTCTGAAATTGTTACTTACTTATTCCTTCCATGCTACCCCCTC
TTTTTGTCTTTAAGTGTGTGCCTCTGGGCATGCTTA------------TGTCTCAAGGTN
------------TGTNATTAAAGTAAATAAATCAGC

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               27-697, gnl|bosTau2|chrX (6074685-6075353)
               

               
               27-697, gnl|Hg17|chr5 (122978787-122979454)
               

               
               27-697, gnl|Mm7|chr18 (54335679-54336317)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               27-697, gnl|bosTau2|chrX (6074685-6075353)
               

               
               27-697, gnl|Hg17|chr5 (122978787-122979454)
               

               
               27-697, gnl|Mm7|chr18 (54335679-54336317)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               spl (0.143184)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               spl (0.143184)

	27-697, gnl\|bosTau2\|chrX (6074685-6075353)
	27-697, gnl\|Hg17\|chr5 (122978787-122979454)
	27-697, gnl\|Mm7\|chr18 (54335679-54336317)