Non-Coding RNA Search

Ss1.1-uFN-UNL-P-FN-aw-a-08-0-UNL.s1.3

Sequence:


               
               GCGGCGGCGGGCTCATGGCGACGGGGGGGCGCGGCCTCCTGCTGCTCGCGCTCTGGGCGC
TGGCGCGTCCAGAGCCAGGAGTCCGGGAAGAGGGCGCGACGGAGGGTGGCGGCGGCGCGA
GCCGGCGGCGCCGGCCGTCGTGGTGGAGGAGGAGCGCTGCACGGTGGAGCGCCGGGCGGA
CCTCAGCTACGCCGAGTTCGTGCAGCACTACGCCTTCTCCAGACCTGTCATTCTGCAGGG
GCTCACTGACAACGCGTTCCGGGCCCTGTGCTCCCGTGAAAGGCTGCTGGCCTCGTTTGC
GGACAGCATGGTCCGGTTGAGCACTGCCAACACCTACTCCTACCAGAAAGTGGACCTGCC
CTTTCAGGAGTATGTGGAGCAGATGCTGCACCCTCAGGACCCTTTCTCCATGGGCAACGG
TACCACTCCTGCTTACAGCTTTGGGATCGCAGGAGCCGGCTCTGGAGTGCCCTTCCACTG
GCATGGGCCCGGGTTCTCGGAGGTGATCTACGGCCGCAAGCGCTGGTTCCTGTATCCCCC
GAGAAGACACCCGAGTTCCATCCCAACAAGACCACACTGGCTTGGCTCCGGGACACATAC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GCGGCGGCGGGCTCATGGCGACGGGGGGGCGCGGCCTCCTGCTGCTCGCGCTCTGGGCGC
TGGCGCGTCCAGAGCCAGGAGTCCGGGAAGAGGGCGCGACGGAGGGTGGCGGCGGCGCGA
GCCGGCGGCGCCGGCCGTCGTGGTGGAGGAGGAGCGCTGCACGGTGGAGCGCCGGGCGGA
CCTCAGCTACGCCGAGTTCGTGCAGCACTACGCCTTCTCCAGACCTGTCATTCTGCAGGG
GCTCACTGACAACGCGTTCCGGGCCCTGTGCTCCCGTGAAAGGCTGCTGGCCTCGTTTGC
GGACAGCATGGTCCGGTTGAGCACTGCCAACACCTACTCCTACCAGAAAGTGGACCTGCC
CTTTCAGGAGTATGTGGAGCAGATGCTGCACCCTCAGGACCCTTTCTCCATGGGCAACGG
TACCACTCCTGCTTACAGCTTTGGGATCGCAGGAGCCGGCTCTGGAGTGCCCTTCCACTG
GCATGGGCCCGGGTTCTCGGAGGTGATCTACGGCCGCAAGCGCTGGTTCCTGTATCCCCC
GAGAAGACACCCGAGTTCCATCCCAACAAGACCACACTGGCTTGGCTCCGGGACACATAC

Coded protein: 1 entry(ies)

More info

Coded protein: 1 entry(ies)

Help | Less info


               
               Q71RB8_HUMAN

Coded protein: 1 entry(ies)

Help | Less info

Protein identifier


               
               Q71RB8_HUMAN

Aligned organism(s): 6 entry(ies)

More info

Aligned organism(s): 6 entry(ies)

Help | Less info


               
               108-211, gnl|bosTau2|chr25 (1214135-1214238)
               

               
               108-211, gnl|Hg17|chr16 (674157-674063)
               

               
               108-211, gnl|Mm7|chr17 (24012479-24012582)
               


               
               256-361, gnl|bosTau2|chr25 (1214527-1214632)
               

               
               256-361, gnl|Hg17|chr16 (673780-673675)
               

               
               256-361, gnl|Mm7|chr17 (24012848-24012952)

Aligned organism(s): 6 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               108-211, gnl|bosTau2|chr25 (1214135-1214238)
               

               
               108-211, gnl|Hg17|chr16 (674157-674063)
               

               
               108-211, gnl|Mm7|chr17 (24012479-24012582)
               


               
               256-361, gnl|bosTau2|chr25 (1214527-1214632)
               

               
               256-361, gnl|Hg17|chr16 (673780-673675)
               

               
               256-361, gnl|Mm7|chr17 (24012848-24012952)

Expressed library(ies): 2 entry(ies)

More info

Expressed library(ies): 2 entry(ies)

Help | Less info


               
               cly (0.120642)
               

               
               pgl (0.118483)

Expressed library(ies): 2 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cly (0.120642)
               

               
               pgl (0.118483)

	108-211, gnl\|bosTau2\|chr25 (1214135-1214238)
	108-211, gnl\|Hg17\|chr16 (674157-674063)
	108-211, gnl\|Mm7\|chr17 (24012479-24012582)

	256-361, gnl\|bosTau2\|chr25 (1214527-1214632)
	256-361, gnl\|Hg17\|chr16 (673780-673675)
	256-361, gnl\|Mm7\|chr17 (24012848-24012952)