Ss1.1-uFN-UNL-P-FN-bi-a-02-0-UNL.s1.3
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GGGCTGTTTGTCCCTGAGTGTGACGAGCACGGACACTACGCGCCCACCCAGTGCCATGGC AGCACTGGCTACTGCTGGTGTGTGGACCGTGACGGACGCGAGGTGGAGGGCACCAGGACC AGACCCGGGATGAGGCCCCCCTGTCTGAGTACAGTGGCACCCCCAATCCACCACGGACCC GCAGTTCCCACCGCTGTGATCCCCCTGCCACCTGGGACCCACCTGCTCTTTGCCCAGACG GGGAAGATAGAGCGCCTGCCCCTGGCGGGAAGCACCATGACCAAGACGGACGCCAAGGCG CTGCTCCACGCCCCGGATAAAGTCATCATCGGACTGGCCTTCGACTGTGTGGACCAGATG GTGTACTGGACCGACATCAGTGAGCCTTCCATTGGGAGAGCCAGTCTGCATGGTGGGGAG CCAACCACCATCCTTCGACAAGATCTTGGAAGCCCAGAAGGTATTGCTCTTGACCATCTT GGCCGCAACATCTTCTGGACGGATTCTCACCTGGATCGAATAGAAGTTGCCAAGCTGGAT GGCACCCAGCGCCGGGTGCTGTTTGATACTGATTTGGTGAATCCCAGAGGCATCGTAACG GATTCCGTGCGAGGGAACCTTTATTGGACAGATTGGAACAGAGACAGCCCCAAAATTGAA ACTTCCTACATGGATGGCACAAACCGGAGGGTCCTTGTGCAGGACGAC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GGGCTGTTTGTCCCTGAGTGTGACGAGCACGGACACTACGCGCCCACCCAGTGCCATGGC AGCACTGGCTACTGCTGGTGTGTGGACCGTGACGGACGCGAGGTGGAGGGCACCAGGACC AGACCCGGGATGAGGCCCCCCTGTCTGAGTACAGTGGCACCCCCAATCCACCACGGACCC GCAGTTCCCACCGCTGTGATCCCCCTGCCACCTGGGACCCACCTGCTCTTTGCCCAGACG GGGAAGATAGAGCGCCTGCCCCTGGCGGGAAGCACCATGACCAAGACGGACGCCAAGGCG CTGCTCCACGCCCCGGATAAAGTCATCATCGGACTGGCCTTCGACTGTGTGGACCAGATG GTGTACTGGACCGACATCAGTGAGCCTTCCATTGGGAGAGCCAGTCTGCATGGTGGGGAG CCAACCACCATCCTTCGACAAGATCTTGGAAGCCCAGAAGGTATTGCTCTTGACCATCTT GGCCGCAACATCTTCTGGACGGATTCTCACCTGGATCGAATAGAAGTTGCCAAGCTGGAT GGCACCCAGCGCCGGGTGCTGTTTGATACTGATTTGGTGAATCCCAGAGGCATCGTAACG GATTCCGTGCGAGGGAACCTTTATTGGACAGATTGGAACAGAGACAGCCCCAAAATTGAA ACTTCCTACATGGATGGCACAAACCGGAGGGTCCTTGTGCAGGACGAC |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 37 entry(ies) | More info |
| Aligned organism(s): 37 entry(ies) | Help | Less info |
| 138-316, gnl|bosTau2|chr28 (4160252-4160074) | |
| 138-316, gnl|canFam2|chr4 (7002417-7002250) | |
| 138-316, gnl|danRer3|chr11 (42686678-42686842) | |
| 138-316, gnl|dasNov1|scaffold_3187 (39953-39786) | |
| 138-316, gnl|echTel1|scaffold_317370 (83267-83107) | |
| 138-316, gnl|fr1|chrUn (236161758-236161919) | |
| 138-316, gnl|galGal2|chr3 (34152162-34151995) | |
| 138-316, gnl|hg17|chr1 (232480222-232480389) | |
| 138-316, gnl|Hg17|chr1 (232480404-232480226) | |
| 138-316, gnl|mm7|chr13 (12843355-12843188) | |
| 138-316, gnl|Mm7|chr13 (12843171-12843349) | |
| 138-316, gnl|monDom2|scaffold_13 (49556953-49556786) | |
| 138-316, gnl|oryCun1|scaffold_175054 (84466-84299) | |
| 138-316, gnl|panTro1|chr1 (216309271-216309438) | |
| 138-316, gnl|rheMac2|chr1 (221031910-221031743) | |
| 138-316, gnl|rn3|chr17 (66879501-66879668) | |
| 138-316, gnl|tetNig1|chr17 (1918202-1918056) | |
| 138-316, gnl|xenTro1|scaffold_371 (62784-62954) | |
| 441-615, gnl|bosTau2|chr28 (4149289-4149115) | |
| 441-615, gnl|canFam2|chr4 (7009951-7009776) | |
| 441-615, gnl|danRer3|chr11 (42680391-42680566) | |
| 441-615, gnl|dasNov1|scaffold_3187 (47434-47259) | |
| 441-615, gnl|echTel1|scaffold_232565 (1339-1163) | |
| 441-615, gnl|fr1|chrUn (236160935-236161110) | |
| 441-615, gnl|galGal2|chr3 (34157361-34157186) | |
| 441-615, gnl|hg17|chr1 (232470951-232471126) | |
| 441-615, gnl|Hg17|chr1 (232471125-232470951) | |
| 441-615, gnl|loxAfr1|scaffold_11758 (11076-10901) | |
| 441-615, gnl|mm7|chr13 (12849240-12849065) | |
| 441-615, gnl|Mm7|chr13 (12849064-12849238) | |
| 441-615, gnl|monDom2|scaffold_13 (49571487-49571312) | |
| 441-615, gnl|oryCun1|scaffold_212268 (19217-19392) | |
| 441-615, gnl|panTro1|chr1 (216299999-216300174) | |
| 441-615, gnl|rheMac2|chr1 (221041257-221041082) | |
| 441-615, gnl|rn3|chr17 (66872714-66872889) | |
| 441-615, gnl|tetNig1|chr17 (1919078-1918903) | |
| 441-615, gnl|xenTro1|scaffold_371 (61167-61342) |
| Aligned organism(s): 37 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 138-316, gnl|bosTau2|chr28 (4160252-4160074) | |
| 138-316, gnl|canFam2|chr4 (7002417-7002250) | |
| 138-316, gnl|danRer3|chr11 (42686678-42686842) | |
| 138-316, gnl|dasNov1|scaffold_3187 (39953-39786) | |
| 138-316, gnl|echTel1|scaffold_317370 (83267-83107) | |
| 138-316, gnl|fr1|chrUn (236161758-236161919) | |
| 138-316, gnl|galGal2|chr3 (34152162-34151995) | |
| 138-316, gnl|hg17|chr1 (232480222-232480389) | |
| 138-316, gnl|Hg17|chr1 (232480404-232480226) | |
| 138-316, gnl|mm7|chr13 (12843355-12843188) | |
| 138-316, gnl|Mm7|chr13 (12843171-12843349) | |
| 138-316, gnl|monDom2|scaffold_13 (49556953-49556786) | |
| 138-316, gnl|oryCun1|scaffold_175054 (84466-84299) | |
| 138-316, gnl|panTro1|chr1 (216309271-216309438) | |
| 138-316, gnl|rheMac2|chr1 (221031910-221031743) | |
| 138-316, gnl|rn3|chr17 (66879501-66879668) | |
| 138-316, gnl|tetNig1|chr17 (1918202-1918056) | |
| 138-316, gnl|xenTro1|scaffold_371 (62784-62954) | |
| 441-615, gnl|bosTau2|chr28 (4149289-4149115) | |
| 441-615, gnl|canFam2|chr4 (7009951-7009776) | |
| 441-615, gnl|danRer3|chr11 (42680391-42680566) | |
| 441-615, gnl|dasNov1|scaffold_3187 (47434-47259) | |
| 441-615, gnl|echTel1|scaffold_232565 (1339-1163) | |
| 441-615, gnl|fr1|chrUn (236160935-236161110) | |
| 441-615, gnl|galGal2|chr3 (34157361-34157186) | |
| 441-615, gnl|hg17|chr1 (232470951-232471126) | |
| 441-615, gnl|Hg17|chr1 (232471125-232470951) | |
| 441-615, gnl|loxAfr1|scaffold_11758 (11076-10901) | |
| 441-615, gnl|mm7|chr13 (12849240-12849065) | |
| 441-615, gnl|Mm7|chr13 (12849064-12849238) | |
| 441-615, gnl|monDom2|scaffold_13 (49571487-49571312) | |
| 441-615, gnl|oryCun1|scaffold_212268 (19217-19392) | |
| 441-615, gnl|panTro1|chr1 (216299999-216300174) | |
| 441-615, gnl|rheMac2|chr1 (221041257-221041082) | |
| 441-615, gnl|rn3|chr17 (66872714-66872889) | |
| 441-615, gnl|tetNig1|chr17 (1919078-1918903) | |
| 441-615, gnl|xenTro1|scaffold_371 (61167-61342) |
| Expressed library(ies): 3 entry(ies) | More info |
| Expressed library(ies): 3 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| nep (0.183925) | |
| eep (0.122564) | |
| jej (0.0989218) |