Ss1.1-uFN-UNL-P-FN-bn-b-05-0-UNL.s1.3
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GCGGCCGCTCGGGAGGGGGCGACGTGAGATGGGGGCGGCGGCAGCCGAAGCAGATCGCAC GCTCTTTGTGGGCAACCTTGAGACGAAGGTGACAGAGGAGCTTCTTTTTGAGCTTTTCCA CCAGGCTGGGCCTGTAATAAAAGTGAAAATTCCAAAAGATAAAGATGGAAAACCGAAGCA ATTTGCATTTGTGAATTTCAAACATGAAGTATCTGTTCCTTATGCAATGAATCTCCTTAA TGGAATAAAACTTTTTGGAAGGCCCATCAAAATTCAGTTTAGATCAGGAAGTAGCCATGC CTCACAAGAGGTCAGTTTGTCATATCCCCAGCATCATGTTGGAAATTCAAGTCCTACTTC CACATCTCCTAGCAGGTACGAAAGAACGGTGGATAATATGACTCCATCAACACAGATACT TCAGAGATCTTTCTCTTGTTCAGAAAATTTTCAGAGACAAGCAGTGATGAACAATGTTTT GAGACAGATGTCATATGGAGGGAAATTTGGTTCTCCACACCTGGATCCATCAGGATTTTC GCCATCAGTTCAGTCCCATAATCATTCTTTCAACCAGTCTTCAAGCTCCCCATGGCGCCA AGATACACCGTCACAGCGAAAAGT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GCGGCCGCTCGGGAGGGGGCGACGTGAGATGGGGGCGGCGGCAGCCGAAGCAGATCGCAC GCTCTTTGTGGGCAACCTTGAGACGAAGGTGACAGAGGAGCTTCTTTTTGAGCTTTTCCA CCAGGCTGGGCCTGTAATAAAAGTGAAAATTCCAAAAGATAAAGATGGAAAACCGAAGCA ATTTGCATTTGTGAATTTCAAACATGAAGTATCTGTTCCTTATGCAATGAATCTCCTTAA TGGAATAAAACTTTTTGGAAGGCCCATCAAAATTCAGTTTAGATCAGGAAGTAGCCATGC CTCACAAGAGGTCAGTTTGTCATATCCCCAGCATCATGTTGGAAATTCAAGTCCTACTTC CACATCTCCTAGCAGGTACGAAAGAACGGTGGATAATATGACTCCATCAACACAGATACT TCAGAGATCTTTCTCTTGTTCAGAAAATTTTCAGAGACAAGCAGTGATGAACAATGTTTT GAGACAGATGTCATATGGAGGGAAATTTGGTTCTCCACACCTGGATCCATCAGGATTTTC GCCATCAGTTCAGTCCCATAATCATTCTTTCAACCAGTCTTCAAGCTCCCCATGGCGCCA AGATACACCGTCACAGCGAAAAGT |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 49 entry(ies) | More info |
| Aligned organism(s): 49 entry(ies) | Help | Less info |
| 123-288, gnl|bosTau2|chr15 (11752170-11752005) | |
| 123-288, gnl|canFam2|chr21 (37067868-37067715) | |
| 123-288, gnl|canFam2|chr5 (21968261-21968073) | |
| 123-288, gnl|danRer3|chrNA (25905907-25905745) | |
| 123-288, gnl|danRer3|chrNA (25905742-25905932) | |
| 123-288, gnl|dasNov1|scaffold_4582 (89169-89007) | |
| 123-288, gnl|dasNov1|scaffold_4582 (89004-89197) | |
| 123-288, gnl|echTel1|scaffold_283207 (43205-43043) | |
| 123-288, gnl|echTel1|scaffold_283207 (43040-43216) | |
| 123-288, gnl|fr1|chrUn (9821013-9821180) | |
| 123-288, gnl|galGal2|chr24 (4429684-4429522) | |
| 123-288, gnl|galGal2|chr24 (4429519-4429692) | |
| 123-288, gnl|hg17|chr11 (113777629-113777822) | |
| 123-288, gnl|Hg17|chr11 (113777628-113777793) | |
| 123-288, gnl|hg17|chr2 (80301772-80301933) | |
| 123-288, gnl|loxAfr1|scaffold_17328 (21010-20852) | |
| 123-288, gnl|loxAfr1|scaffold_9593 (39235-39042) | |
| 123-288, gnl|mm7|chr8 (65302546-65302384) | |
| 123-288, gnl|mm7|chr9 (48455952-48455756) | |
| 123-288, gnl|Mm7|chr9 (48455951-48455786) | |
| 123-288, gnl|monDom2|scaffold_2 (126326204-126326027) | |
| 123-288, gnl|monDom2|scaffold_53 (11595287-11595125) | |
| 123-288, gnl|oryCun1|scaffold_215146 (8590-8448) | |
| 123-288, gnl|oryCun1|scaffold_215146 (8445-8587) | |
| 123-288, gnl|panTro1|chr12 (83114855-83115016) | |
| 123-288, gnl|panTro1|chr9 (115781643-115781836) | |
| 123-288, gnl|rheMac2|chr14 (112888126-112887964) | |
| 123-288, gnl|rheMac2|chr14 (112887961-112888153) | |
| 123-288, gnl|rn3|chr8 (51792995-51793157) | |
| 123-288, gnl|rn3|chr8 (51793160-51792963) | |
| 123-288, gnl|tetNig1|chrUn_random (130864035-130864209) | |
| 123-288, gnl|xenTro1|scaffold_742 (334333-334495) | |
| 123-288, gnl|xenTro1|scaffold_742 (334498-334331) | |
| 466-624, gnl|bosTau2|chr15 (11747317-11747156) | |
| 466-624, gnl|canFam2|chr5 (21961567-21961388) | |
| 466-624, gnl|dasNov1|scaffold_4582 (94345-94536) | |
| 466-624, gnl|echTel1|scaffold_283207 (47922-48110) | |
| 466-624, gnl|galGal2|chr24 (4431363-4431522) | |
| 466-624, gnl|hg17|chr11 (113783362-113783551) | |
| 466-624, gnl|Hg17|chr11 (113783376-113783537) | |
| 466-624, gnl|loxAfr1|scaffold_17328 (21193-21365) | |
| 466-624, gnl|mm7|chr9 (48451771-48451586) | |
| 466-624, gnl|Mm7|chr9 (48451756-48451597) | |
| 466-624, gnl|monDom2|scaffold_2 (126318440-126318235) | |
| 466-624, gnl|oryCun1|scaffold_206279 (306-115) | |
| 466-624, gnl|panTro1|chr9 (115787363-115787552) | |
| 466-624, gnl|rheMac2|chr14 (112893206-112893395) | |
| 466-624, gnl|rn3|chr8 (51789222-51789036) | |
| 466-624, gnl|xenTro1|scaffold_742 (327764-327576) |
| Aligned organism(s): 49 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 123-288, gnl|bosTau2|chr15 (11752170-11752005) | |
| 123-288, gnl|canFam2|chr21 (37067868-37067715) | |
| 123-288, gnl|canFam2|chr5 (21968261-21968073) | |
| 123-288, gnl|danRer3|chrNA (25905907-25905745) | |
| 123-288, gnl|danRer3|chrNA (25905742-25905932) | |
| 123-288, gnl|dasNov1|scaffold_4582 (89169-89007) | |
| 123-288, gnl|dasNov1|scaffold_4582 (89004-89197) | |
| 123-288, gnl|echTel1|scaffold_283207 (43205-43043) | |
| 123-288, gnl|echTel1|scaffold_283207 (43040-43216) | |
| 123-288, gnl|fr1|chrUn (9821013-9821180) | |
| 123-288, gnl|galGal2|chr24 (4429684-4429522) | |
| 123-288, gnl|galGal2|chr24 (4429519-4429692) | |
| 123-288, gnl|hg17|chr11 (113777629-113777822) | |
| 123-288, gnl|Hg17|chr11 (113777628-113777793) | |
| 123-288, gnl|hg17|chr2 (80301772-80301933) | |
| 123-288, gnl|loxAfr1|scaffold_17328 (21010-20852) | |
| 123-288, gnl|loxAfr1|scaffold_9593 (39235-39042) | |
| 123-288, gnl|mm7|chr8 (65302546-65302384) | |
| 123-288, gnl|mm7|chr9 (48455952-48455756) | |
| 123-288, gnl|Mm7|chr9 (48455951-48455786) | |
| 123-288, gnl|monDom2|scaffold_2 (126326204-126326027) | |
| 123-288, gnl|monDom2|scaffold_53 (11595287-11595125) | |
| 123-288, gnl|oryCun1|scaffold_215146 (8590-8448) | |
| 123-288, gnl|oryCun1|scaffold_215146 (8445-8587) | |
| 123-288, gnl|panTro1|chr12 (83114855-83115016) | |
| 123-288, gnl|panTro1|chr9 (115781643-115781836) | |
| 123-288, gnl|rheMac2|chr14 (112888126-112887964) | |
| 123-288, gnl|rheMac2|chr14 (112887961-112888153) | |
| 123-288, gnl|rn3|chr8 (51792995-51793157) | |
| 123-288, gnl|rn3|chr8 (51793160-51792963) | |
| 123-288, gnl|tetNig1|chrUn_random (130864035-130864209) | |
| 123-288, gnl|xenTro1|scaffold_742 (334333-334495) | |
| 123-288, gnl|xenTro1|scaffold_742 (334498-334331) | |
| 466-624, gnl|bosTau2|chr15 (11747317-11747156) | |
| 466-624, gnl|canFam2|chr5 (21961567-21961388) | |
| 466-624, gnl|dasNov1|scaffold_4582 (94345-94536) | |
| 466-624, gnl|echTel1|scaffold_283207 (47922-48110) | |
| 466-624, gnl|galGal2|chr24 (4431363-4431522) | |
| 466-624, gnl|hg17|chr11 (113783362-113783551) | |
| 466-624, gnl|Hg17|chr11 (113783376-113783537) | |
| 466-624, gnl|loxAfr1|scaffold_17328 (21193-21365) | |
| 466-624, gnl|mm7|chr9 (48451771-48451586) | |
| 466-624, gnl|Mm7|chr9 (48451756-48451597) | |
| 466-624, gnl|monDom2|scaffold_2 (126318440-126318235) | |
| 466-624, gnl|oryCun1|scaffold_206279 (306-115) | |
| 466-624, gnl|panTro1|chr9 (115787363-115787552) | |
| 466-624, gnl|rheMac2|chr14 (112893206-112893395) | |
| 466-624, gnl|rn3|chr8 (51789222-51789036) | |
| 466-624, gnl|xenTro1|scaffold_742 (327764-327576) |
| Expressed library(ies): 2 entry(ies) | More info |
| Expressed library(ies): 2 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| nlu (0.191681) | |
| jej (0.0989218) |