Ss1.1-uFN-UNL-P-FN-bo-d-01-0-UNL.s1.3
|
CCCTGCTGCTCAATGGCTACCAGACGCTGGAGGACTTCAAAGAGCTGCGGGAAACACACC
TCAATGAGCTGAACATCATGGACCCGCAGCATCGGGCCAAGCTGCTTACGGCCGCTGAGC
TGCTGCTGGACTACGACACTGGCAGTGAGGAAGCGGAAGAGGGTGCCGAGAGCAGCCAGG
AGCCAGTGGCACACACGGTGTCGGAGCCCAAGGTGGACATCCCTCGCGACTCCGGCTGCT
TCGAGGGCTCCGAGAGTGGGCGCGACGAGGCGGAGCTGGCGAGCGCCGAAGAGCAGCTGC
ACAGCCTCTCCCTGGCCGGGTCGCCTTGAGGCCGCAGTGGCTCAGGCCGAGGCCAGGCAG
GCATCCTGCGCGGATGGGCCCGGCCTCCCAGTGTCCCCAGGCCAGAGGACTGTCACTGAG
CCGGCTCATTTCCCCCAGGGGTCCCCTGGGCCATAGAGGCCGGCCGGGCCCTATAAGGTG
TGGCTGGAGTACATGCTGAGCCACCAAGGCACATCGTCTGCCCGACCACCTCCATCCGCC
AGCTACTGACAGCACAGCCCTTCCAGTTGCATCTGCAGCAAGGAGGGGCACCAAAGGGCC
ACCGGGCCCCTGTCCCTCACCACCAAGGCCTCCAAACCCTCCTCACCTGCACACCACCTT
CCCTTCTCACTGCTTCTGAAAAGGGGGCCAAAGTCAGTGGTTCAGGTCAACACCCGAGCA
AAGTCTGGCCACTGAAAAGGACTCTTCTCTGAACACGGGGAGAATCCAGATCTTCCTCAA
TAAGGTTTGAAGAAAGCCACATGTACCTTTTCTACTTACCTTCACCTTAACTTTTTTTTT
TATATAGGTTTAGCCACTAAATCACTGTCACTTGAACACAGAGTGCCTTCCTCAATCTGG
GTCAAGGACTGGTCAGGATAAGAATGAATAGTCAGGATAAGAATGGCTGGTTGCTGAGGG
CCTTGCCAACTCTGACATTCTGTGACATTAAATGTCTGCTGTCCTGTTACCTGCAGCCCA
GGACACCAGTGGGTTTCACTGAGGGGGCTGGAGAGGCCTCGGCTCCTCCTGCTTATCCTC
TGCATACTTCTGCGAGTGACTCAGGCCAAGCTGCAACTCCCCCAAGCTTAAAACAATGCC
CATACCTCAGACAATGCACCCCCACCTTCCACTCCCAGCTCATCAATGACGTTTCCCCCA
AGGCTGGTGGCAGATGGCCAGATCTGGCTTCCAAGGATAGATTGGCCCCTCGGAAGCTGA
ATGCAGGTCCAGGCCGGGACAGCACAAAGCTTGACGTTGGGGAGTCTACTACTCCGCCTT
TGCTCTGCAACAGGTTTTGATGTATCTTGAACTTCAGAAGGGGAGGGAGAGCGTTGGTAG
GGGCCTCCCTTGACCCCAGTACCAAATCTGTACCCTCAATTCCGAGAGTAACCCTTGTGC
CCACCTCTTGGATTGGCTGCCTAGTGTGGACACACTTCTGGACCTACTACCAGGAATTCT
GGTAGAAGGTATCCTGGGGGAATGTTTGGGGTGTAAATACAACGGGGTGTGGGGAGACGG
GTTAGTAGCAATAAAGGGTAGAACTAAAAAAAAAAAAAAAAAAAAAAA
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
CCCTGCTGCTCAATGGCTACCAGACGCTGGAGGACTTCAAAGAGCTGCGGGAAACACACC
TCAATGAGCTGAACATCATGGACCCGCAGCATCGGGCCAAGCTGCTTACGGCCGCTGAGC
TGCTGCTGGACTACGACACTGGCAGTGAGGAAGCGGAAGAGGGTGCCGAGAGCAGCCAGG
AGCCAGTGGCACACACGGTGTCGGAGCCCAAGGTGGACATCCCTCGCGACTCCGGCTGCT
TCGAGGGCTCCGAGAGTGGGCGCGACGAGGCGGAGCTGGCGAGCGCCGAAGAGCAGCTGC
ACAGCCTCTCCCTGGCCGGGTCGCCTTGAGGCCGCAGTGGCTCAGGCCGAGGCCAGGCAG
GCATCCTGCGCGGATGGGCCCGGCCTCCCAGTGTCCCCAGGCCAGAGGACTGTCACTGAG
CCGGCTCATTTCCCCCAGGGGTCCCCTGGGCCATAGAGGCCGGCCGGGCCCTATAAGGTG
TGGCTGGAGTACATGCTGAGCCACCAAGGCACATCGTCTGCCCGACCACCTCCATCCGCC
AGCTACTGACAGCACAGCCCTTCCAGTTGCATCTGCAGCAAGGAGGGGCACCAAAGGGCC
ACCGGGCCCCTGTCCCTCACCACCAAGGCCTCCAAACCCTCCTCACCTGCACACCACCTT
CCCTTCTCACTGCTTCTGAAAAGGGGGCCAAAGTCAGTGGTTCAGGTCAACACCCGAGCA
AAGTCTGGCCACTGAAAAGGACTCTTCTCTGAACACGGGGAGAATCCAGATCTTCCTCAA
TAAGGTTTGAAGAAAGCCACATGTACCTTTTCTACTTACCTTCACCTTAACTTTTTTTTT
TATATAGGTTTAGCCACTAAATCACTGTCACTTGAACACAGAGTGCCTTCCTCAATCTGG
GTCAAGGACTGGTCAGGATAAGAATGAATAGTCAGGATAAGAATGGCTGGTTGCTGAGGG
CCTTGCCAACTCTGACATTCTGTGACATTAAATGTCTGCTGTCCTGTTACCTGCAGCCCA
GGACACCAGTGGGTTTCACTGAGGGGGCTGGAGAGGCCTCGGCTCCTCCTGCTTATCCTC
TGCATACTTCTGCGAGTGACTCAGGCCAAGCTGCAACTCCCCCAAGCTTAAAACAATGCC
CATACCTCAGACAATGCACCCCCACCTTCCACTCCCAGCTCATCAATGACGTTTCCCCCA
AGGCTGGTGGCAGATGGCCAGATCTGGCTTCCAAGGATAGATTGGCCCCTCGGAAGCTGA
ATGCAGGTCCAGGCCGGGACAGCACAAAGCTTGACGTTGGGGAGTCTACTACTCCGCCTT
TGCTCTGCAACAGGTTTTGATGTATCTTGAACTTCAGAAGGGGAGGGAGAGCGTTGGTAG
GGGCCTCCCTTGACCCCAGTACCAAATCTGTACCCTCAATTCCGAGAGTAACCCTTGTGC
CCACCTCTTGGATTGGCTGCCTAGTGTGGACACACTTCTGGACCTACTACCAGGAATTCT
GGTAGAAGGTATCCTGGGGGAATGTTTGGGGTGTAAATACAACGGGGTGTGGGGAGACGG
GTTAGTAGCAATAAAGGGTAGAACTAAAAAAAAAAAAAAAAAAAAAAA
|
|
3-141, gnl|bosTau2|chr22 (7216814-7216952) |
|
3-141, gnl|canFam2|chrX (104061193-104061337) |
|
3-141, gnl|danRer3|chr14 (56438838-56438976) |
|
3-141, gnl|dasNov1|scaffold_33600 (3244-3102) |
|
3-141, gnl|echTel1|scaffold_293078 (4396-4252) |
|
3-141, gnl|fr1|chrUn (107087473-107087341) |
|
3-141, gnl|galGal2|chr4 (157040-157184) |
|
3-141, gnl|hg17|chrX (128652514-128652658) |
|
3-141, gnl|Hg17|chrX (128652515-128652653) |
|
3-141, gnl|loxAfr1|scaffold_10054 (16752-16896) |
|
3-141, gnl|mm7|chrX (43251670-43251814) |
|
3-141, gnl|Mm7|chrX (43251671-43251809) |
|
3-141, gnl|monDom2|scaffold_126 (2387201-2387345) |
|
3-141, gnl|oryCun1|scaffold_117198 (8692-8836) |
|
3-141, gnl|panTro1|chrX (132885324-132885468) |
|
3-141, gnl|rheMac2|chrX (128029616-128029760) |
|
3-141, gnl|rn3|chrX (134597828-134597972) |
|
3-141, gnl|tetNig1|chrUn_random (125634076-125633942) |
|
3-141, gnl|xenTro1|scaffold_263 (1091246-1091385) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
3-141, gnl|bosTau2|chr22 (7216814-7216952) |
|
3-141, gnl|canFam2|chrX (104061193-104061337) |
|
3-141, gnl|danRer3|chr14 (56438838-56438976) |
|
3-141, gnl|dasNov1|scaffold_33600 (3244-3102) |
|
3-141, gnl|echTel1|scaffold_293078 (4396-4252) |
|
3-141, gnl|fr1|chrUn (107087473-107087341) |
|
3-141, gnl|galGal2|chr4 (157040-157184) |
|
3-141, gnl|hg17|chrX (128652514-128652658) |
|
3-141, gnl|Hg17|chrX (128652515-128652653) |
|
3-141, gnl|loxAfr1|scaffold_10054 (16752-16896) |
|
3-141, gnl|mm7|chrX (43251670-43251814) |
|
3-141, gnl|Mm7|chrX (43251671-43251809) |
|
3-141, gnl|monDom2|scaffold_126 (2387201-2387345) |
|
3-141, gnl|oryCun1|scaffold_117198 (8692-8836) |
|
3-141, gnl|panTro1|chrX (132885324-132885468) |
|
3-141, gnl|rheMac2|chrX (128029616-128029760) |
|
3-141, gnl|rn3|chrX (134597828-134597972) |
|
3-141, gnl|tetNig1|chrUn_random (125634076-125633942) |
|
3-141, gnl|xenTro1|scaffold_263 (1091246-1091385) |
|
med (0.58126) |
|
fty (0.351679) |
|
ill (0.351185) |
|
thg (0.253582) |
|
clu (0.239292) |
|
cmu (0.186393) |
|
cje (0.165235) |
|
lnt (0.142308) |
|
cly (0.120642) |
|
cbl (0.114797) |
|
jej (0.0989218) |
|
med (0.58126) |
|
fty (0.351679) |
|
ill (0.351185) |
|
thg (0.253582) |
|
clu (0.239292) |
|
cmu (0.186393) |
|
cje (0.165235) |
|
lnt (0.142308) |
|
cly (0.120642) |
|
cbl (0.114797) |
|
jej (0.0989218) |
