Non-Coding RNA Search

Ss1.1-uFN-UNL-P-FN-br-b-12-0-UNL.s1.3

Sequence:


               
               CTCGGACAGCGGCAACTACACCTGTGTGGTCAGGAACAGTGCGGGAGAGGACCGGAAGAT
GGTCTGGATCCTCGTCCACGTGCAGGCGCCCAGGATCAACGGGAACCCCGACGCCATCAC
CACAGTGCGGGAGATCGCCCCGGTAGGCAGTCGGAAACTCATTGACTGCCAAGCAGAAGG
CACCCCCATGCCGAGGGTCTTGTGGGCTTTCCCTGAGGGTGTGGTCCTACCCGCCCCTTA
CCATGGCAACCGGATCACCATCCATGGCAACGGGACCCTGGACATCCGGCGTCTGCGGAA
GAGTGATTCAGTCCAGCTGGTGTGTATCGGGCGCAATGAAGGTGGGGAGGCCAGGCTGAT
TGTCCAGCTTACTGTCCTGGAACCCGTGGAAAAGCCCATCTTCCACGACCCAGTCAGCGA
GAAGATCACCGCCATGGCCGGACACACCATCAGTCTCAACTGCTCTGCAGCCGGGACCCC
GACGCCCACCCTGCTCTGGGTCCTCCCCAACCGGACAGAGCTCCGGAGCGGCCAGCAGCT
GCAGCGGTTCTACCACAAGGGCGACGGCAAGCTCCACATCAGTGACCTTTCATCCGTGGA
CGCGGGGGCTTACCGCTGCGTGGCCAGGAACTCGGCGGGCTACACAGAGAGGCTGGTCTC
CCTGAAGGTGGGGCTGAAGCCTGAGACCAGCAACCGGTACCACAACCTCATCAGCATCAT
CAACGGAGAGACCCTGCACCTGCCCTGCGCACCCCCGGGGGGCCGGCAGGTGCGGTCCTC
TTGGACGCTGCCCAATGGCCTGGT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CTCGGACAGCGGCAACTACACCTGTGTGGTCAGGAACAGTGCGGGAGAGGACCGGAAGAT
GGTCTGGATCCTCGTCCACGTGCAGGCGCCCAGGATCAACGGGAACCCCGACGCCATCAC
CACAGTGCGGGAGATCGCCCCGGTAGGCAGTCGGAAACTCATTGACTGCCAAGCAGAAGG
CACCCCCATGCCGAGGGTCTTGTGGGCTTTCCCTGAGGGTGTGGTCCTACCCGCCCCTTA
CCATGGCAACCGGATCACCATCCATGGCAACGGGACCCTGGACATCCGGCGTCTGCGGAA
GAGTGATTCAGTCCAGCTGGTGTGTATCGGGCGCAATGAAGGTGGGGAGGCCAGGCTGAT
TGTCCAGCTTACTGTCCTGGAACCCGTGGAAAAGCCCATCTTCCACGACCCAGTCAGCGA
GAAGATCACCGCCATGGCCGGACACACCATCAGTCTCAACTGCTCTGCAGCCGGGACCCC
GACGCCCACCCTGCTCTGGGTCCTCCCCAACCGGACAGAGCTCCGGAGCGGCCAGCAGCT
GCAGCGGTTCTACCACAAGGGCGACGGCAAGCTCCACATCAGTGACCTTTCATCCGTGGA
CGCGGGGGCTTACCGCTGCGTGGCCAGGAACTCGGCGGGCTACACAGAGAGGCTGGTCTC
CCTGAAGGTGGGGCTGAAGCCTGAGACCAGCAACCGGTACCACAACCTCATCAGCATCAT
CAACGGAGAGACCCTGCACCTGCCCTGCGCACCCCCGGGGGGCCGGCAGGTGCGGTCCTC
TTGGACGCTGCCCAATGGCCTGGT

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

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               1-804, gnl|bosTau2|chrX (48319408-48320211)
               

               
               1-804, gnl|Hg17|chrX (3222375-3221572)
               

               
               1-804, gnl|Mm7|chr3 (59447827-59447024)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-804, gnl|bosTau2|chrX (48319408-48320211)
               

               
               1-804, gnl|Hg17|chrX (3222375-3221572)
               

               
               1-804, gnl|Mm7|chr3 (59447827-59447024)

Expressed library(ies): 3 entry(ies)

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Expressed library(ies): 3 entry(ies)

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               pla (0.133672)
               

               
               eep (0.122564)
               

               
               jca (0.11396)

Expressed library(ies): 3 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               pla (0.133672)
               

               
               eep (0.122564)
               

               
               jca (0.11396)

	1-804, gnl\|bosTau2\|chrX (48319408-48320211)
	1-804, gnl\|Hg17\|chrX (3222375-3221572)
	1-804, gnl\|Mm7\|chr3 (59447827-59447024)