Ss1.1-uFN-UNL-P-FN-br-g-05-0-UNL.s1.3
|
TCCCCACATGCTTCCTGACCCTTGACGGCCAAGGGCAAATATGTTGGTACAAAAAGGTTC
AAGAGCCCTGATAACTCCCCGGTTCATACACTACAGGTGCCCCGGTCCCCTGGGCAGGGG
ATTCAGGCTCCATTACCTCCCCAAGGGGCTCTTATGGTCAGCCCCACCCCTGGGGGCCAT
TTCCCCATTAACCACCCCTCAGCCCAAGGAAGGGTGAGGGGGAAGGGCTGTCAGTTATAT
TAAGGTGGTTGTTGTTGTTGTTTTAAACAAAATGGAGAAGCATAAATAAATAAAAGGGTT
TATCTCAGTTCC
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
TCCCCACATGCTTCCTGACCCTTGACGGCCAAGGGCAAATATGTTGGTACAAAAAGGTTC
AAGAGCCCTGATAACTCCCCGGTTCATACACTACAGGTGCCCCGGTCCCCTGGGCAGGGG
ATTCAGGCTCCATTACCTCCCCAAGGGGCTCTTATGGTCAGCCCCACCCCTGGGGGCCAT
TTCCCCATTAACCACCCCTCAGCCCAAGGAAGGGTGAGGGGGAAGGGCTGTCAGTTATAT
TAAGGTGGTTGTTGTTGTTGTTTTAAACAAAATGGAGAAGCATAAATAAATAAAAGGGTT
TATCTCAGTTCC
|
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
55-310, ip21b08.b1 Brain - Cerebellum Library (DOGEST8) Canis familiaris
(gb|CK997630.1|), blast E-value=0, identity=95.31% |
|
41-312, BovGen_08271 normal cattle brain Bos taurus cDNA clone (gb|CO879946.1|),
blast E-value=0, identity=94.49% |
|
55-310, iv26f05.b1 Brain - Cerebellum Library (DOGEST8) Canis familiaris
(gb|CX004155.1|), blast E-value=0, identity=95.31% |
|
55-310, iv26f05.g1 Brain - Cerebellum Library (DOGEST8) Canis familiaris
(gb|CX004156.1|), blast E-value=0, identity=95.31% |
|
41-307, LB01714.CR_I07 GC_BGC-17 Bos taurus cDNA clone IMAGE (gb|DV814771.1|),
blast E-value=0, identity=94.38% |
|
41-307, LB02991.CR_K24 GC_BGC-29 Bos taurus cDNA clone IMAGE (gb|EE370721.1|),
blast E-value=0, identity=94.38% |
PigEST conread start position and end position of sequence similarity to another annotated EST (NCBI dbEST),
transcript identifier and annotation,
blast E-value,
PigEST conread identity to the similar transcript
|
55-310, ip21b08.b1 Brain - Cerebellum Library (DOGEST8) Canis familiaris
(gb|CK997630.1|), blast E-value=0, identity=95.31% |
|
41-312, BovGen_08271 normal cattle brain Bos taurus cDNA clone (gb|CO879946.1|),
blast E-value=0, identity=94.49% |
|
55-310, iv26f05.b1 Brain - Cerebellum Library (DOGEST8) Canis familiaris
(gb|CX004155.1|), blast E-value=0, identity=95.31% |
|
55-310, iv26f05.g1 Brain - Cerebellum Library (DOGEST8) Canis familiaris
(gb|CX004156.1|), blast E-value=0, identity=95.31% |
|
41-307, LB01714.CR_I07 GC_BGC-17 Bos taurus cDNA clone IMAGE (gb|DV814771.1|),
blast E-value=0, identity=94.38% |
|
41-307, LB02991.CR_K24 GC_BGC-29 Bos taurus cDNA clone IMAGE (gb|EE370721.1|),
blast E-value=0, identity=94.38% |
Human gene identifier and UTR site,
human gene reading direction
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
nms (0.213858) |
|
nco (0.161734) |
|
nms (0.213858) |
|
nco (0.161734) |