Ss1.1-uFN-UNL-P-FN-bx-b-08-0-UNL.s1.3.5
|
GTCGTCTCCTTTGGTGTACATATAAAATCACTATTGAATCCACTGAAGTGCTTCAAGGGG
AATCTTGGATTTCTGGCACCTTATCTATGATGATTCTTTTGTAATTTGATTAGCTAACTG
TGGATAACCCTGTCCATAGCTTTTACCACTAAACAAAAACCATCGAACTTATTTGTTTAA
ACTTACTAATTTTGGCATTGACTTTGAAGGCTACTCTGTTGGAAGAAAGACAGGTAGTGA
TGATTGGGGCTGATATTCTCTTTTGAAAAATGGGGGAGAATCGTTCTTCCCCTGTACACA
CCAAGAATAATGTCAAAAATGCCACAATGGAGTTCTCCCGTGGTGTAGCAGGTTAAGGAT
CGGGTGTTGTCACTGCAGTGGCTTGGGTCATTGCTGTGGCTTGGGTTTGATCCCTGGCCT
GGGAAATTCCACATGCTGCGAGCACGGCCAAAAAAAAAAGCCACCAGCTCTTCTGTTGTG
GCCTGTTTGTTCTGATTGCTGCTGTATACTTAAAATTTCAAATTGAACACATTTGCTAAA
GTTTCTATTTGGTTACTTTTTCTCTAGTTTCCAGTAATCACATTATATTCTTCTAAAAAG
CGATTCATTCTAGATTTTACTTGGGGAATATTCTTTATACAACTTACCTTCTCTTTGAGA
CTCATAATTAAATCATGATATGCACTAAGTTTTGTGAATCAGGACCCTAAATGTTTAATT
GTAAATAATTTAATTTTCACACAATTGTTAGAGCTTTTTGTTCAAGGTTTTTTTCCCCAA
TTAAAAGTTTCAACTGCTTCTGAAATAACTATGTATAGTAGATTATGCAAACCTTTACAG
GCATAAATATTTAAACTGTAATGCTAATTTTAAGAAGTTGCAATAAAGCTTCAGCTAAGC
CTGTGTATGTACAAATACTAAGGTTTGTATTATATTTCATACATGCATTTTGGAGGATTA
AAGAATGCCTGCTTTTCCTTTGCAACTTGCTTGTGTAAATTCAGGTTCTAAAAAGGCAGT
AATATGTTTGTGGTATGAGGAAATAAAAGAATGGAATTGGCATTGCGAAAAAAAAAAAAA |
Blue-coloured subsequences are predicted RNA structures by RNAz
|
GTCGTCTCCTTTGGTGTACATATAAAATCACTATTGAATCCACTGAAGTGCTTCAAGGGG
AATCTTGGATTTCTGGCACCTTATCTATGATGATTCTTTTGTAATTTGATTAGCTAACTG
TGGATAACCCTGTCCATAGCTTTTACCACTAAACAAAAACCATCGAACTTATTTGTTTAA
ACTTACTAATTTTGGCATTGACTTTGAAGGCTACTCTGTTGGAAGAAAGACAGGTAGTGA
TGATTGGGGCTGATATTCTCTTTTGAAAAATGGGGGAGAATCGTTCTTCCCCTGTACACA
CCAAGAATAATGTCAAAAATGCCACAATGGAGTTCTCCCGTGGTGTAGCAGGTTAAGGAT
CGGGTGTTGTCACTGCAGTGGCTTGGGTCATTGCTGTGGCTTGGGTTTGATCCCTGGCCT
GGGAAATTCCACATGCTGCGAGCACGGCCAAAAAAAAAAGCCACCAGCTCTTCTGTTGTG
GCCTGTTTGTTCTGATTGCTGCTGTATACTTAAAATTTCAAATTGAACACATTTGCTAAA
GTTTCTATTTGGTTACTTTTTCTCTAGTTTCCAGTAATCACATTATATTCTTCTAAAAAG
CGATTCATTCTAGATTTTACTTGGGGAATATTCTTTATACAACTTACCTTCTCTTTGAGA
CTCATAATTAAATCATGATATGCACTAAGTTTTGTGAATCAGGACCCTAAATGTTTAATT
GTAAATAATTTAATTTTCACACAATTGTTAGAGCTTTTTGTTCAAGGTTTTTTTCCCCAA
TTAAAAGTTTCAACTGCTTCTGAAATAACTATGTATAGTAGATTATGCAAACCTTTACAG
GCATAAATATTTAAACTGTAATGCTAATTTTAAGAAGTTGCAATAAAGCTTCAGCTAAGC
CTGTGTATGTACAAATACTAAGGTTTGTATTATATTTCATACATGCATTTTGGAGGATTA
AAGAATGCCTGCTTTTCCTTTGCAACTTGCTTGTGTAAATTCAGGTTCTAAAAAGGCAGT
AATATGTTTGTGGTATGAGGAAATAAAAGAATGGAATTGGCATTGCGAAAAAAAAAAAAA |
|
2-343, gnl|bosTau2|chr23 (5375625-5375996) |
|
2-343, gnl|canFam2|chr12 (24002720-24003281) |
|
2-343, gnl|dasNov1|scaffold_42891 (3674-3098) |
|
2-343, gnl|hg17|chr6 (53470533-53471080) |
|
2-343, gnl|Hg17|chr6 (53471067-53470666) |
|
2-343, gnl|loxAfr1|scaffold_56799 (776-1334) |
|
2-343, gnl|mm7|chr9 (77835672-77835245) |
|
2-343, gnl|monDom2|scaffold_0 (183567427-183566761) |
|
2-343, gnl|oryCun1|scaffold_175353 (41604-42111) |
|
2-343, gnl|panTro1|chr5 (54500186-54500732) |
|
2-343, gnl|rheMac2|chr4 (53116861-53117413) |
|
2-343, gnl|rn3|chr8 (82781654-82781227) |
| |
|
454-1070, gnl|bosTau2|chr23 (5375969-5376576) |
|
454-1070, gnl|Hg17|chr6 (53470689-53470098) |
|
454-1070, gnl|Mm7|chr9 (77835483-77836039) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
2-343, gnl|bosTau2|chr23 (5375625-5375996) |
|
2-343, gnl|canFam2|chr12 (24002720-24003281) |
|
2-343, gnl|dasNov1|scaffold_42891 (3674-3098) |
|
2-343, gnl|hg17|chr6 (53470533-53471080) |
|
2-343, gnl|Hg17|chr6 (53471067-53470666) |
|
2-343, gnl|loxAfr1|scaffold_56799 (776-1334) |
|
2-343, gnl|mm7|chr9 (77835672-77835245) |
|
2-343, gnl|monDom2|scaffold_0 (183567427-183566761) |
|
2-343, gnl|oryCun1|scaffold_175353 (41604-42111) |
|
2-343, gnl|panTro1|chr5 (54500186-54500732) |
|
2-343, gnl|rheMac2|chr4 (53116861-53117413) |
|
2-343, gnl|rn3|chr8 (82781654-82781227) |
| |
|
454-1070, gnl|bosTau2|chr23 (5375969-5376576) |
|
454-1070, gnl|Hg17|chr6 (53470689-53470098) |
|
454-1070, gnl|Mm7|chr9 (77835483-77836039) |
|
tra (0.369276) |
|
rec (0.346141) |
|
fco (0.314416) |
|
cbe (0.239234) |
|
spc (0.226732) |
|
fli (0.202881) |
|
duo (0.172801) |
|
cut (0.169924) |
|
ski (0.146735) |
|
liv (0.146284) |
|
lin (0.145603) |
|
hyp (0.142837) |
|
lyg (0.133103) |
|
nmm (0.132802) |
|
kid (0.129735) |
|
ova (0.129132) |
|
eru (0.120048) |
|
eje (0.0988338) |
|
tra (0.369276) |
|
rec (0.346141) |
|
fco (0.314416) |
|
cbe (0.239234) |
|
spc (0.226732) |
|
fli (0.202881) |
|
duo (0.172801) |
|
cut (0.169924) |
|
ski (0.146735) |
|
liv (0.146284) |
|
lin (0.145603) |
|
hyp (0.142837) |
|
lyg (0.133103) |
|
nmm (0.132802) |
|
kid (0.129735) |
|
ova (0.129132) |
|
eru (0.120048) |
|
eje (0.0988338) |
