Ss1.1-uFN-UNL-P-FN-by-a-05-0-UNL.s1.3
|
GCCAGCCCCGGCAGACAGCGGTAGGATGGCTATGGAGCGCCACGGATGGAGGTGGCTACC
CGGCCTCCTGGCGCTGCTGGCGGCTCTGGTGGTGCCGAAAGGGTGGGCCAGGGACACCTC
TGGCGCGGAGAGCCTGGGTCTGTGGCCCTTGCCCTTTGCCGTGGATATATCCCCGCGCTC
GCTTCACCTCTCTCCCAACAACTTTTTCTTCGGCCACAGCCCCACTTCCAAAGCCGGCTC
CTCCTGCGAAATCCTTCAGGAAGCGTTTCGGCGATATTATGACTTTATTTTTGGTTTCTA
CAAGTGGCATCAAGGCTCTTACCAGTTATGTTTTGGCACGGAATTGCAGCAGCTTCAAGT
CCACGTGGAGTCGGAGTGTGACACTTTCCCCAGCATCTCTTCAAATGAGTCCTATGTTTT
ACATGTAAAAGGACCAGAGGCCTTGCTCAGGGCCAACACAGTTTGGGGAGCTTTGCGAGG
TTTAGAGACCTTTAGCCAGTTAATTTATCAAGATTCTTATGGGACTTTCACCGTCAATGA
ATCCGAAATTATAGATTTTCCGAGGTTTCCTCATAGAGGAATTTTAATTGACACAGGGCG
ACACTTCCTGTCAGTAAAGACCATTTTTAAAACTCTGGATGCCATGGCTTTTAATAAGTT
TAATGTTCTCCACTGGCACATAGTTGATGACCAGTCTTTCCCTTATCAGAGCATCAATTT
TCCTCTACTAAGCAGTAAGGGAAGCTATTCTTTGTCTCATGTTTATACACCAAATGATGT
TCGGATGGTGATTGAATATGCCCGAATACGAGGGATTCGGGTCATGCCAGAATTTGATAC
CCCTGGCCATTCACGGTCTTGGGGAAAAGGCCAGAAAGACCTCCTGACGCCATGTTATAG
AAAACAAGTTCTCTCTGGGACTTTTGGACCTATTAACCCTATTTTGAATACAACTTATAA
CTTCCTGTCTAAATTTTTCAAAGAAATTAGTACCGTGTTTCCAGATGAATTCATTCATAT
TGGAGGAGATGAAGTAGACTTTGATTGTTGGGCATCCAATTCAGAAATCCTGCAGTTCAT
GCAGGAAAAAGGCTTTAGCAAAAATTTCACTAAACTCCAATCTTTCTACGTGTTCAAGAT
TTCAAATATGATTTCAGCCATGAAGAAGAGACCCATAGTCTGGCAAGAGGCTTTTGATGG
CAGAGACAAGTTTATGCCCGGCACAGTAGTTCAGGTATGGAAAATAGAAGACTATAAATG
GGAACAAAGTCTTATTACGAAAGCTGGCTTCCCTGTGATCCTTTCTGCTCCATGGTACTT
AGACTTGATCAGTTATGGACAAGATTGGAAGAATTACTATGAAGTGGAACCTCAAGATTT
TCCTGGTTCTGACAAAGAGAGAAAGCGTGTCCTTGGCGGAGAAGCTTGCCTATGGGGAGA
ATATGTGGATGCAACCAACCTTACTCCAAGACTATGGCCTCGAGCAAGTGCTGTTGGTGA
GAGACTCTGGAGTCATAAAGATGTCCGAGACATACATGATGCCTACAGCAGACTAACCAT
TCACCGCTGCAGAATGGTCAGGCGAGGAATAGCTGCAGAACCTCTCTTTACTGGCTACTG
TAACCATGAGCACAGAATGTAAAAATGAGCTGAAACAGAGGAGGGAGAAGCCCACAGTAA
TCTGTACTACAATCAATATGAATGTAATACCATGTTTTTGAATAAAATATCTTTTTTGTT
GATTAAAAAAAAAAAAAAAAAAAA
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
GCCAGCCCCGGCAGACAGCGGTAGGATGGCTATGGAGCGCCACGGATGGAGGTGGCTACC
CGGCCTCCTGGCGCTGCTGGCGGCTCTGGTGGTGCCGAAAGGGTGGGCCAGGGACACCTC
TGGCGCGGAGAGCCTGGGTCTGTGGCCCTTGCCCTTTGCCGTGGATATATCCCCGCGCTC
GCTTCACCTCTCTCCCAACAACTTTTTCTTCGGCCACAGCCCCACTTCCAAAGCCGGCTC
CTCCTGCGAAATCCTTCAGGAAGCGTTTCGGCGATATTATGACTTTATTTTTGGTTTCTA
CAAGTGGCATCAAGGCTCTTACCAGTTATGTTTTGGCACGGAATTGCAGCAGCTTCAAGT
CCACGTGGAGTCGGAGTGTGACACTTTCCCCAGCATCTCTTCAAATGAGTCCTATGTTTT
ACATGTAAAAGGACCAGAGGCCTTGCTCAGGGCCAACACAGTTTGGGGAGCTTTGCGAGG
TTTAGAGACCTTTAGCCAGTTAATTTATCAAGATTCTTATGGGACTTTCACCGTCAATGA
ATCCGAAATTATAGATTTTCCGAGGTTTCCTCATAGAGGAATTTTAATTGACACAGGGCG
ACACTTCCTGTCAGTAAAGACCATTTTTAAAACTCTGGATGCCATGGCTTTTAATAAGTT
TAATGTTCTCCACTGGCACATAGTTGATGACCAGTCTTTCCCTTATCAGAGCATCAATTT
TCCTCTACTAAGCAGTAAGGGAAGCTATTCTTTGTCTCATGTTTATACACCAAATGATGT
TCGGATGGTGATTGAATATGCCCGAATACGAGGGATTCGGGTCATGCCAGAATTTGATAC
CCCTGGCCATTCACGGTCTTGGGGAAAAGGCCAGAAAGACCTCCTGACGCCATGTTATAG
AAAACAAGTTCTCTCTGGGACTTTTGGACCTATTAACCCTATTTTGAATACAACTTATAA
CTTCCTGTCTAAATTTTTCAAAGAAATTAGTACCGTGTTTCCAGATGAATTCATTCATAT
TGGAGGAGATGAAGTAGACTTTGATTGTTGGGCATCCAATTCAGAAATCCTGCAGTTCAT
GCAGGAAAAAGGCTTTAGCAAAAATTTCACTAAACTCCAATCTTTCTACGTGTTCAAGAT
TTCAAATATGATTTCAGCCATGAAGAAGAGACCCATAGTCTGGCAAGAGGCTTTTGATGG
CAGAGACAAGTTTATGCCCGGCACAGTAGTTCAGGTATGGAAAATAGAAGACTATAAATG
GGAACAAAGTCTTATTACGAAAGCTGGCTTCCCTGTGATCCTTTCTGCTCCATGGTACTT
AGACTTGATCAGTTATGGACAAGATTGGAAGAATTACTATGAAGTGGAACCTCAAGATTT
TCCTGGTTCTGACAAAGAGAGAAAGCGTGTCCTTGGCGGAGAAGCTTGCCTATGGGGAGA
ATATGTGGATGCAACCAACCTTACTCCAAGACTATGGCCTCGAGCAAGTGCTGTTGGTGA
GAGACTCTGGAGTCATAAAGATGTCCGAGACATACATGATGCCTACAGCAGACTAACCAT
TCACCGCTGCAGAATGGTCAGGCGAGGAATAGCTGCAGAACCTCTCTTTACTGGCTACTG
TAACCATGAGCACAGAATGTAAAAATGAGCTGAAACAGAGGAGGGAGAAGCCCACAGTAA
TCTGTACTACAATCAATATGAATGTAATACCATGTTTTTGAATAAAATATCTTTTTTGTT
GATTAAAAAAAAAAAAAAAAAAAA
|
|
gi|47522648|ref|NP_999086.1| |
Protein identifier
|
gi|47522648|ref|NP_999086.1| |
|
637-789, gnl|bosTau2|chr20 (3891457-3891305) |
|
637-789, gnl|Hg17|chr5 (74036799-74036948) |
|
637-789, gnl|Mm7|chr13 (94256074-94255922) |
| |
|
868-1051, gnl|bosTau2|chr15 (5835757-5835940) |
|
868-1051, gnl|Hg17|chr5 (74047089-74047272) |
|
868-1051, gnl|Mm7|chr13 (94252419-94252236) |
| |
|
1209-1387, gnl|bosTau2|chr15 (5838989-5839167) |
|
1209-1387, gnl|Hg17|chr5 (74050376-74050554) |
|
1209-1387, gnl|Mm7|chr13 (94248460-94248282) |
| |
|
1579-1736, gnl|bosTau2|chr15 (5840932-5841099) |
|
1579-1736, gnl|Hg17|chr5 (74052696-74052863) |
|
1579-1736, gnl|Mm7|chr13 (94246996-94246829) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
637-789, gnl|bosTau2|chr20 (3891457-3891305) |
|
637-789, gnl|Hg17|chr5 (74036799-74036948) |
|
637-789, gnl|Mm7|chr13 (94256074-94255922) |
| |
|
868-1051, gnl|bosTau2|chr15 (5835757-5835940) |
|
868-1051, gnl|Hg17|chr5 (74047089-74047272) |
|
868-1051, gnl|Mm7|chr13 (94252419-94252236) |
| |
|
1209-1387, gnl|bosTau2|chr15 (5838989-5839167) |
|
1209-1387, gnl|Hg17|chr5 (74050376-74050554) |
|
1209-1387, gnl|Mm7|chr13 (94248460-94248282) |
| |
|
1579-1736, gnl|bosTau2|chr15 (5840932-5841099) |
|
1579-1736, gnl|Hg17|chr5 (74052696-74052863) |
|
1579-1736, gnl|Mm7|chr13 (94246996-94246829) |
|
ute (1.85898) |
|
csk (0.562984) |
|
cmu (0.55918) |
|
spl (0.429553) |
|
nmm (0.398406) |
|
sag (0.36543) |
|
sto (0.359648) |
|
pgl (0.35545) |
|
nje (0.33184) |
|
eje (0.296501) |
|
pty (0.285429) |
|
fce (0.271592) |
|
kid (0.259471) |
|
ova (0.258264) |
|
jca (0.22792) |
|
spc (0.226732) |
|
nlu (0.191681) |
|
fbs (0.175346) |
|
fhi (0.169578) |
|
cki (0.165235) |
|
nco (0.161734) |
|
csp (0.161186) |
|
tbr (0.154178) |
|
pla (0.133672) |
|
sug (0.127291) |
|
eep (0.122564) |
|
clu (0.119646) |
|
ecc (0.115035) |
|
cty (0.10408) |
|
jej (0.0989218) |
|
ute (1.85898) |
|
csk (0.562984) |
|
cmu (0.55918) |
|
spl (0.429553) |
|
nmm (0.398406) |
|
sag (0.36543) |
|
sto (0.359648) |
|
pgl (0.35545) |
|
nje (0.33184) |
|
eje (0.296501) |
|
pty (0.285429) |
|
fce (0.271592) |
|
kid (0.259471) |
|
ova (0.258264) |
|
jca (0.22792) |
|
spc (0.226732) |
|
nlu (0.191681) |
|
fbs (0.175346) |
|
fhi (0.169578) |
|
cki (0.165235) |
|
nco (0.161734) |
|
csp (0.161186) |
|
tbr (0.154178) |
|
pla (0.133672) |
|
sug (0.127291) |
|
eep (0.122564) |
|
clu (0.119646) |
|
ecc (0.115035) |
|
cty (0.10408) |
|
jej (0.0989218) |
