Non-Coding RNA Search

Ss1.1-uFN-UNL-P-FN-cf-a-01-0-UNL.s1.3

Sequence:


               
               GGACTCAGGCTCTGAGCAGAGACTGTCCACCTATGACAACGTGCCCCCGCCCAGCCTCTT
TCCCAGCACGTCCAGTGTGGCCAGCATGCCGTGGTCCGAGGCCTCAGCCAGAGCCTCAGT
CAGCAGCTGCACGGCTTGCCGGGCCAGTGACTCTTCCGCCTGCAGTTCCCTGCACACCGA
GGGGGCCCTTGAGCCCTCCCCTGTCCCCAGCAGCAGCGAGGGGCACAGATCCCCGGACCT
GGACCACGGCCTGGATGGTGTGGGCTCCTGCATCAGCAGCAGTGAGCCCAGTGACCCAGG
CAGCCCCGCCCAGGACCGCGCCCGCCGCTCCGAGGCTCTCCAGGGCCTGGTCACAGAGCT
CAGGGCAGAGCTGTGCCGGCAGAGGATTGAGTACGAGACAAGTGTGAAAAGACTCGAAGA
AGGTAGTGCTGACCTGAGGAAACGAATGTCACGGCTAGAGGAAGAACTAGACCAGGAAAA
GAAAAAGTACACAATGCTGGAAATAAAGCTGAGGAACTCAGAGCGGGCACGGGAAGACGC
GGAGAAGAGGAACCAGCTGCTGCAGAAGGAAATGGAGGAGTTTTTCTCAACCCTGGGCAG
CCTGACTGTTGGGGCAAAAGGTGCCAGAGTGCCAAAGTAAAGGAGTGGGGAGAGCTCACT
TCTGTGAGGCTCGCCCTCCCCTGGGCTGGAGCCAGAGCCTCTGCAGCTTGGACCTGGGCC
TCAGTGGTGCCAGGAAATCCCGAGCTGGCTGAGGAGAGCAGTCCCAACCCTGCAGCCCAA
GCCCCTTGTGGGATCTGGATGCTGTTCTGACCATGCAGGGCATGGCAGGCCTCGGAAGGG
ATGGTCCTGTGGCCACCAAACAGATGGCACCTGGGATCTGAGTGGCCCACTGGAAACTTT
TTGCATTCTTTA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGACTCAGGCTCTGAGCAGAGACTGTCCACCTATGACAACGTGCCCCCGCCCAGCCTCTT
TCCCAGCACGTCCAGTGTGGCCAGCATGCCGTGGTCCGAGGCCTCAGCCAGAGCCTCAGT
CAGCAGCTGCACGGCTTGCCGGGCCAGTGACTCTTCCGCCTGCAGTTCCCTGCACACCGA
GGGGGCCCTTGAGCCCTCCCCTGTCCCCAGCAGCAGCGAGGGGCACAGATCCCCGGACCT
GGACCACGGCCTGGATGGTGTGGGCTCCTGCATCAGCAGCAGTGAGCCCAGTGACCCAGG
CAGCCCCGCCCAGGACCGCGCCCGCCGCTCCGAGGCTCTCCAGGGCCTGGTCACAGAGCT
CAGGGCAGAGCTGTGCCGGCAGAGGATTGAGTACGAGACAAGTGTGAAAAGACTCGAAGA
AGGTAGTGCTGACCTGAGGAAACGAATGTCACGGCTAGAGGAAGAACTAGACCAGGAAAA
GAAAAAGTACACAATGCTGGAAATAAAGCTGAGGAACTCAGAGCGGGCACGGGAAGACGC
GGAGAAGAGGAACCAGCTGCTGCAGAAGGAAATGGAGGAGTTTTTCTCAACCCTGGGCAG
CCTGACTGTTGGGGCAAAAGGTGCCAGAGTGCCAAAGTAAAGGAGTGGGGAGAGCTCACT
TCTGTGAGGCTCGCCCTCCCCTGGGCTGGAGCCAGAGCCTCTGCAGCTTGGACCTGGGCC
TCAGTGGTGCCAGGAAATCCCGAGCTGGCTGAGGAGAGCAGTCCCAACCCTGCAGCCCAA
GCCCCTTGTGGGATCTGGATGCTGTTCTGACCATGCAGGGCATGGCAGGCCTCGGAAGGG
ATGGTCCTGTGGCCACCAAACAGATGGCACCTGGGATCTGAGTGGCCCACTGGAAACTTT
TTGCATTCTTTA

Coded protein: 1 entry(ies)

More info

Coded protein: 1 entry(ies)

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               gi|26347059|dbj|BAC37178.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|26347059|dbj|BAC37178.1|

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               409-912, gnl|bosTau2|chr28 (32732516-32733039)
               

               
               409-912, gnl|Hg17|chr10 (49324671-49324105)
               

               
               409-912, gnl|Mm7|chr14 (30799112-30799680)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               409-912, gnl|bosTau2|chr28 (32732516-32733039)
               

               
               409-912, gnl|Hg17|chr10 (49324671-49324105)
               

               
               409-912, gnl|Mm7|chr14 (30799112-30799680)

Expressed library(ies): 4 entry(ies)

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Expressed library(ies): 4 entry(ies)

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               nlu (0.191681)
               

               
               hyp (0.142837)
               

               
               lnt (0.142308)
               

               
               cly (0.120642)

Expressed library(ies): 4 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               nlu (0.191681)
               

               
               hyp (0.142837)
               

               
               lnt (0.142308)
               

               
               cly (0.120642)

	409-912, gnl\|bosTau2\|chr28 (32732516-32733039)
	409-912, gnl\|Hg17\|chr10 (49324671-49324105)
	409-912, gnl\|Mm7\|chr14 (30799112-30799680)