Ss1.1-uFN-UNL-P-FN-cp-f-12-0-UNL.s1.3
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT GAGCTGCATGTGTTTTATTGTTCCTCGCCGTTGCTTTTAAAGTACTCTGCTTTAGGGTGA CGGAAGGGGCTGGGGGCAGGTCACTCAGAAGCCCCCAGCCCAGAGCTGCACCGACAGCGG CCCTGCTGGAGTCCCAGCCCCTGTTGGTGCGGGCAGAGCCCAGGGCCCTGTGTGGACCTG GGGCGGCAGCAGCGGGGCTGGGGCAGGGCCTCCGTGGCTGTACCTGTGGCCGGCCCATTC CCCCGCCGCCGGCCTCCCCGCCTCCTTGCTTCCAGTGGTGGAGTGGTGGGGGGGTCCCGA GGGCGTGGAGGTCAGGCACTAATGAGAGGACAGTGCCAGCAGCTTGTCTCGGAGCTTCTC CAGAAGCAGCAGCGCCTTCACCGCCAGCAGCCTGCAGTCCTCGTCCGGGTCCTTCTCAGC CACATCTGCCAGCCAGGACCGGGTCTCCAGCAGCTCGTCCGGCAGGTCTGCCAGCAGCCG CTCAGCTGGAAGGCTGAGAAGGACGGCGGAGACGGCAGACAGCAAGCCCCGGCGCATGTA CCCATCGCCATGGAAACGAAGGACCCACACGAACTCCAGGAGGGCCTTGCCCATGGGCAC AGCCACCGAGGTGTTCTCAGCCAGGTACATCAGGGCCCCTAAGGTGTGGGCCAGCCTCCC GAGAACCAGCTGGTCCTCTCCCAGCAGGTCAAAGGTCACCAGAGGCTTGTCGAAACGCTG AATGAGGGGGAAAAAGAAGTAGCCAGCCACCGCGTTGAATTCATTGGGGACAGGGGCCAG TCCCCGCCCAGCGGAGCCCTTGGAGAACCGCCGGGTCTTGCTTCGGATGCGCTCCTCCAC CACTGCCCGCCAGGTGGGAGCCACGGTGCTGCTGGGCTGGGGGCTGGGGCCCGAGGCACT CCGCTGGGCCCTCCCGAGACGCCCAGGCCGCGACAGCTCCTGGGCAGCCAGAGTCAGGAC GTCCAGGATATCCATGCGCTGCCGGAGGCTGTAGTTGAGGGCGTAGAACTGTGCAGTCAG GTACTCGGCTACCCGTGCCGGGTCTGTGACTGTGACAGCCACCAGGGCCCTCTGACGCAG CCCCTCGAAGCCCGCCACGGCCGTCTTCTCCTCCAGGTGCAGCAGCACCTTGGCCAGCTC CACGCTCACCTCCCGCGCGGCAGCCGGGCTCCTGAAGACCAGCCCCTCGAGGGCCCGCAG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT GAGCTGCATGTGTTTTATTGTTCCTCGCCGTTGCTTTTAAAGTACTCTGCTTTAGGGTGA CGGAAGGGGCTGGGGGCAGGTCACTCAGAAGCCCCCAGCCCAGAGCTGCACCGACAGCGG CCCTGCTGGAGTCCCAGCCCCTGTTGGTGCGGGCAGAGCCCAGGGCCCTGTGTGGACCTG GGGCGGCAGCAGCGGGGCTGGGGCAGGGCCTCCGTGGCTGTACCTGTGGCCGGCCCATTC CCCCGCCGCCGGCCTCCCCGCCTCCTTGCTTCCAGTGGTGGAGTGGTGGGGGGGTCCCGA GGGCGTGGAGGTCAGGCACTAATGAGAGGACAGTGCCAGCAGCTTGTCTCGGAGCTTCTC CAGAAGCAGCAGCGCCTTCACCGCCAGCAGCCTGCAGTCCTCGTCCGGGTCCTTCTCAGC CACATCTGCCAGCCAGGACCGGGTCTCCAGCAGCTCGTCCGGCAGGTCTGCCAGCAGCCG CTCAGCTGGAAGGCTGAGAAGGACGGCGGAGACGGCAGACAGCAAGCCCCGGCGCATGTA CCCATCGCCATGGAAACGAAGGACCCACACGAACTCCAGGAGGGCCTTGCCCATGGGCAC AGCCACCGAGGTGTTCTCAGCCAGGTACATCAGGGCCCCTAAGGTGTGGGCCAGCCTCCC GAGAACCAGCTGGTCCTCTCCCAGCAGGTCAAAGGTCACCAGAGGCTTGTCGAAACGCTG AATGAGGGGGAAAAAGAAGTAGCCAGCCACCGCGTTGAATTCATTGGGGACAGGGGCCAG TCCCCGCCCAGCGGAGCCCTTGGAGAACCGCCGGGTCTTGCTTCGGATGCGCTCCTCCAC CACTGCCCGCCAGGTGGGAGCCACGGTGCTGCTGGGCTGGGGGCTGGGGCCCGAGGCACT CCGCTGGGCCCTCCCGAGACGCCCAGGCCGCGACAGCTCCTGGGCAGCCAGAGTCAGGAC GTCCAGGATATCCATGCGCTGCCGGAGGCTGTAGTTGAGGGCGTAGAACTGTGCAGTCAG GTACTCGGCTACCCGTGCCGGGTCTGTGACTGTGACAGCCACCAGGGCCCTCTGACGCAG CCCCTCGAAGCCCGCCACGGCCGTCTTCTCCTCCAGGTGCAGCAGCACCTTGGCCAGCTC CACGCTCACCTCCCGCGCGGCAGCCGGGCTCCTGAAGACCAGCCCCTCGAGGGCCCGCAG |
| Aligned organism(s): 21 entry(ies) | More info |
| Aligned organism(s): 21 entry(ies) | Help | Less info |
| 483-622, gnl|bosTau2|chr25 (2757539-2757675) | |
| 483-622, gnl|Hg17|chr16 (1497721-1497582) | |
| 483-622, gnl|Mm7|chr17 (23284387-23284521) | |
| 858-1028, gnl|bosTau2|chr25 (2758933-2759106) | |
| 858-1028, gnl|Hg17|chr16 (1495604-1495403) | |
| 858-1028, gnl|Mm7|chr17 (23286670-23286870) | |
| 1091-1211, gnl|bosTau2|chr25 (2760010-2760130) | |
| 1091-1211, gnl|canFam2|chr6 (42354620-42354492) | |
| 1091-1211, gnl|danRer3|chr24 (32555256-32555376) | |
| 1091-1211, gnl|fr1|chrUn (22084471-22084350) | |
| 1091-1211, gnl|galGal2|chr14 (20443076-20443203) | |
| 1091-1211, gnl|hg17|chr16 (1492638-1492766) | |
| 1091-1211, gnl|Hg17|chr16 (1492765-1492645) | |
| 1091-1211, gnl|loxAfr1|scaffold_54862 (7015-6887) | |
| 1091-1211, gnl|mm7|chr17 (23288023-23287898) | |
| 1091-1211, gnl|Mm7|chr17 (23287897-23288017) | |
| 1091-1211, gnl|monDom2|scaffold_5 (122497048-122496920) | |
| 1091-1211, gnl|panTro1|chr18 (1567017-1567145) | |
| 1091-1211, gnl|rheMac2|chr20 (1488890-1489018) | |
| 1091-1211, gnl|rn3|chr10 (14353519-14353394) | |
| 1091-1211, gnl|tetNig1|chr2 (4874682-4874802) |
| Aligned organism(s): 21 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 483-622, gnl|bosTau2|chr25 (2757539-2757675) | |
| 483-622, gnl|Hg17|chr16 (1497721-1497582) | |
| 483-622, gnl|Mm7|chr17 (23284387-23284521) | |
| 858-1028, gnl|bosTau2|chr25 (2758933-2759106) | |
| 858-1028, gnl|Hg17|chr16 (1495604-1495403) | |
| 858-1028, gnl|Mm7|chr17 (23286670-23286870) | |
| 1091-1211, gnl|bosTau2|chr25 (2760010-2760130) | |
| 1091-1211, gnl|canFam2|chr6 (42354620-42354492) | |
| 1091-1211, gnl|danRer3|chr24 (32555256-32555376) | |
| 1091-1211, gnl|fr1|chrUn (22084471-22084350) | |
| 1091-1211, gnl|galGal2|chr14 (20443076-20443203) | |
| 1091-1211, gnl|hg17|chr16 (1492638-1492766) | |
| 1091-1211, gnl|Hg17|chr16 (1492765-1492645) | |
| 1091-1211, gnl|loxAfr1|scaffold_54862 (7015-6887) | |
| 1091-1211, gnl|mm7|chr17 (23288023-23287898) | |
| 1091-1211, gnl|Mm7|chr17 (23287897-23288017) | |
| 1091-1211, gnl|monDom2|scaffold_5 (122497048-122496920) | |
| 1091-1211, gnl|panTro1|chr18 (1567017-1567145) | |
| 1091-1211, gnl|rheMac2|chr20 (1488890-1489018) | |
| 1091-1211, gnl|rn3|chr10 (14353519-14353394) | |
| 1091-1211, gnl|tetNig1|chr2 (4874682-4874802) |
| Expressed library(ies): 9 entry(ies) | More info |
| Expressed library(ies): 9 entry(ies) | Help | Less info |
| cga (0.279096) | |
| nep (0.183925) | |
| ill (0.175593) | |
| nco (0.161734) | |
| hyp (0.142837) | |
| eep (0.122564) | |
| eru (0.120048) | |
| ebs (0.118301) | |
| jca (0.11396) |
| Expressed library(ies): 9 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| cga (0.279096) | |
| nep (0.183925) | |
| ill (0.175593) | |
| nco (0.161734) | |
| hyp (0.142837) | |
| eep (0.122564) | |
| eru (0.120048) | |
| ebs (0.118301) | |
| jca (0.11396) |