Non-Coding RNA Search

Ss1.1-uFN-UNL-P-FN-ct-a-10-0-UNL.s1.3

Sequence:


               
               ACCCCGAAGCGAAAATACACCATCCGCTGTTCCTATTGTGGTGAGGAGGCCACTCAAAGG
AAACCTGTGACAATGAGAGCAACAGGGCCCAGGTGTTTGAGAATCTGATCATCACCCTGC
AGGAGCTGACACACACTGAGGAGGAAGGGCCGAGAGAGGCCCCTGCTGAGCCCAGCGACC
CTTCTGAGCCACAGTGAGTGCTAGCCCCCAGCTTTAAAAGACCCCTAACCTATATTCAGA
ATCCAGCAAGGAGAAACATGGGGGGGGTGCTTCTAACTGCATGAATTAATCCACAAAGCG
GCTTTCTTTCGGGCGGAGGAGAAGAGGTCCTGAATATTAGTGGAGGGAGATGGCCTGACC
TCCAGCCTCGCTTCCAGTCCCTGCTGCCTAAGGGTCTACCTTCTGTGTGTCCTCGATGGC
TGTATTATCTTTGTGAAAGTGGTATAATTCATTGTGAAATACTACAAACAACAAAGACAA
GTACAAAAAGTACAAATTACCCAAAACCCTCCAGCCCTTATATAACCATGGTCAACCCTT
TGGTGAAGGTCCTTTTAGATATTTCCCTACCCCTATGTACCCAGATAGATATATGTACAG
ATACAAGTGATCAAATATAAGTGTTGTTCTAAAGTCTGTATTTTTTCAACCAAATAATAT
ATGTCGTGGGCTTCTTTCTATGTCAATAAATCTATATCAGCATCTAAAAAAAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ACCCCGAAGCGAAAATACACCATCCGCTGTTCCTATTGTGGTGAGGAGGCCACTCAAAGG
AAACCTGTGACAATGAGAGCAACAGGGCCCAGGTGTTTGAGAATCTGATCATCACCCTGC
AGGAGCTGACACACACTGAGGAGGAAGGGCCGAGAGAGGCCCCTGCTGAGCCCAGCGACC
CTTCTGAGCCACAGTGAGTGCTAGCCCCCAGCTTTAAAAGACCCCTAACCTATATTCAGA
ATCCAGCAAGGAGAAACATGGGGGGGGTGCTTCTAACTGCATGAATTAATCCACAAAGCG
GCTTTCTTTCGGGCGGAGGAGAAGAGGTCCTGAATATTAGTGGAGGGAGATGGCCTGACC
TCCAGCCTCGCTTCCAGTCCCTGCTGCCTAAGGGTCTACCTTCTGTGTGTCCTCGATGGC
TGTATTATCTTTGTGAAAGTGGTATAATTCATTGTGAAATACTACAAACAACAAAGACAA
GTACAAAAAGTACAAATTACCCAAAACCCTCCAGCCCTTATATAACCATGGTCAACCCTT
TGGTGAAGGTCCTTTTAGATATTTCCCTACCCCTATGTACCCAGATAGATATATGTACAG
ATACAAGTGATCAAATATAAGTGTTGTTCTAAAGTCTGTATTTTTTCAACCAAATAATAT
ATGTCGTGGGCTTCTTTCTATGTCAATAAATCTATATCAGCATCTAAAAAAAAAAAAAAA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               227-718, gnl|bosTau2|chr9 (56409816-56409309)
               

               
               227-718, gnl|Hg17|chrX (117742329-117742805)
               

               
               227-718, gnl|Mm7|chrX (30958434-30958903)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               227-718, gnl|bosTau2|chr9 (56409816-56409309)
               

               
               227-718, gnl|Hg17|chrX (117742329-117742805)
               

               
               227-718, gnl|Mm7|chrX (30958434-30958903)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               fhi (0.169578)
               

               
               fco (0.157208)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               fhi (0.169578)
               

               
               fco (0.157208)

	227-718, gnl\|bosTau2\|chr9 (56409816-56409309)
	227-718, gnl\|Hg17\|chrX (117742329-117742805)
	227-718, gnl\|Mm7\|chrX (30958434-30958903)