Non-Coding RNA Search

Ss1.1-uFN-UNL-P-FN-ct-h-02-0-UNL.s1.3

Sequence:


               
               AACACAGGCTGGAGACAACTCAGTCATTGGTCCTCAGGGACCACTGAGAAGCACTCACCC
GGGCATGCCCGTGACCCCATCCCAAAGGCCATTATCTACTTAAAGTGCTTTTCTAAAGTG
GCTCCCTTGTAAGGGTCCCCCCAAGAGTCTAATGAAGGTGTCCAGAATTGGAAGCAACCT
AGACATTTTCTTAGCATTTCCAGGAAAACCATTAGACTCAAGCAAGGTGGAAACTGCTAT
GAACAAGGAGTTAAAAGCCGACTTCCAGGAATGTGTCAAGGTAGAAGTGGAGTNAAAGGC
ATAAACTGGAGAGAAAAGAAAGGACCTACTCACCTCTCTTCCACCTTCTTCTGTCTTTAG
TAGCCCATCCCTGCTTCCTGGAGCCTTGGCCTCAGACCAGGCACACCTTGAAATACAGAC
CAGTACAAGTGCCAAAGGCAGCCAGGGCTCCCTGAGGAAGGAGGAACAAGGACAGCAAGA
CAGGTGATAAAAAGGTGTTCTAAAAGATAAGTTAATTGAAAATCATAAAAAGAAAAATGG
ACTCTGAAAATATATACTAGTTTATGCACAAATAAAAAAATTTTGAAGAGACCCTTATTC
TTGAGCCTGCTTTAAAAAGGGGAAGAAGTCTACATCACTCTAGCATAATGAGAGTTGTCG
AAATACACGTTTATACACACACATACATAACATACACACACACATTAAATTAGAAGTCTT
TGCCTTGGTTTCTTCGCTTCCTCTGACTTGCCCTGGACAGGGCTGGGCCTGCAGTGAAGG
ACAGGGGCTCACAAGCCCAGCTTCTGCTTGGCCATTGAGGCACGGAGCTGTAGAGTCCCT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AACACAGGCTGGAGACAACTCAGTCATTGGTCCTCAGGGACCACTGAGAAGCACTCACCC
GGGCATGCCCGTGACCCCATCCCAAAGGCCATTATCTACTTAAAGTGCTTTTCTAAAGTG
GCTCCCTTGTAAGGGTCCCCCCAAGAGTCTAATGAAGGTGTCCAGAATTGGAAGCAACCT
AGACATTTTCTTAGCATTTCCAGGAAAACCATTAGACTCAAGCAAGGTGGAAACTGCTAT
GAACAAGGAGTTAAAAGCCGACTTCCAGGAATGTGTCAAGGTAGAAGTGGAGTNAAAGGC
ATAAACTGGAGAGAAAAGAAAGGACCTACTCACCTCTCTTCCACCTTCTTCTGTCTTTAG
TAGCCCATCCCTGCTTCCTGGAGCCTTGGCCTCAGACCAGGCACACCTTGAAATACAGAC
CAGTACAAGTGCCAAAGGCAGCCAGGGCTCCCTGAGGAAGGAGGAACAAGGACAGCAAGA
CAGGTGATAAAAAGGTGTTCTAAAAGATAAGTTAATTGAAAATCATAAAAAGAAAAATGG
ACTCTGAAAATATATACTAGTTTATGCACAAATAAAAAAATTTTGAAGAGACCCTTATTC
TTGAGCCTGCTTTAAAAAGGGGAAGAAGTCTACATCACTCTAGCATAATGAGAGTTGTCG
AAATACACGTTTATACACACACATACATAACATACACACACACATTAAATTAGAAGTCTT
TGCCTTGGTTTCTTCGCTTCCTCTGACTTGCCCTGGACAGGGCTGGGCCTGCAGTGAAGG
ACAGGGGCTCACAAGCCCAGCTTCTGCTTGGCCATTGAGGCACGGAGCTGTAGAGTCCCT

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               3-840, gnl|bosTau2|chrX (26659257-26660096)
               

               
               3-840, gnl|Hg17|chrX (99736356-99737221)
               

               
               3-840, gnl|Mm7|chrX (128656318-128657166)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               3-840, gnl|bosTau2|chrX (26659257-26660096)
               

               
               3-840, gnl|Hg17|chrX (99736356-99737221)
               

               
               3-840, gnl|Mm7|chrX (128656318-128657166)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               pla (0.133672)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               pla (0.133672)

	3-840, gnl\|bosTau2\|chrX (26659257-26660096)
	3-840, gnl\|Hg17\|chrX (99736356-99737221)
	3-840, gnl\|Mm7\|chrX (128656318-128657166)