Ss1.1-uFN-UNL-P-FN-cz-c-09-0-UNL.s1.3
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GCGCGGGGCCTGAGGCGCGGGGCCCCATGGCCAAGACTGTGGCCTATTACTGTGGCCTAT TTCTACGACCCCGACGTGGGCAACTTCCACTACGGGGCTGGGCACCCTATGAAGCCCCAT CGCTTGGCCTTGACCCATAGTCTGGTCCTGCACTACGGTCTTTATAAGAAGATGATCGTC TTCAAGCCGTACCAGGCCTCCCAGCATGACATGTGCCGCTTCCACTCTGAGGACTACATT GACTTCCTGCAGAGAGTCAGTCCCACCAACATGCAAGGCTTCACCAAGAGCCTGAATGCC TTCAACGTGGGCGATGACTGCCCAGTGTTTCCGGGGCTCTTTGAGTTCTGCTCCCGTTAC ACAGGCGCATCTCTGCAAGGAGCAACGCAGCTGAACAACAAGATCTGTGACATTGCCATT AACTGGGCTGGTGGCCTGCACCATGCCAAGAAGTTTGAGGCTTCCGGCTTCTGCTACGTC AACGACATTGTGATCGGCATCCTGGAGCTGCTCAAGTACCACCCCCGCGTGCTCTACATT GACATTGACATCCACCACGGGGACGGGGTTCAGGAGGCCTTCTACCTCACCGACCGGGTC ATGACAGTGTCCTTCCACAAATACGGGAACTACTTCTTCCCCGGCACAGGTGACATGTAC GAAGTCGGAGCC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GCGCGGGGCCTGAGGCGCGGGGCCCCATGGCCAAGACTGTGGCCTATTACTGTGGCCTAT TTCTACGACCCCGACGTGGGCAACTTCCACTACGGGGCTGGGCACCCTATGAAGCCCCAT CGCTTGGCCTTGACCCATAGTCTGGTCCTGCACTACGGTCTTTATAAGAAGATGATCGTC TTCAAGCCGTACCAGGCCTCCCAGCATGACATGTGCCGCTTCCACTCTGAGGACTACATT GACTTCCTGCAGAGAGTCAGTCCCACCAACATGCAAGGCTTCACCAAGAGCCTGAATGCC TTCAACGTGGGCGATGACTGCCCAGTGTTTCCGGGGCTCTTTGAGTTCTGCTCCCGTTAC ACAGGCGCATCTCTGCAAGGAGCAACGCAGCTGAACAACAAGATCTGTGACATTGCCATT AACTGGGCTGGTGGCCTGCACCATGCCAAGAAGTTTGAGGCTTCCGGCTTCTGCTACGTC AACGACATTGTGATCGGCATCCTGGAGCTGCTCAAGTACCACCCCCGCGTGCTCTACATT GACATTGACATCCACCACGGGGACGGGGTTCAGGAGGCCTTCTACCTCACCGACCGGGTC ATGACAGTGTCCTTCCACAAATACGGGAACTACTTCTTCCCCGGCACAGGTGACATGTAC GAAGTCGGAGCC |
| Coded protein: 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 178-297, - strand, RNAz p=0.698118 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 178-297, - strand, RNAz p=0.698118 |
| Aligned organism(s): 22 entry(ies) | More info |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
| 178-320, gnl|bosTau2|chr7 (35466753-35466611) | |
| 178-320, gnl|Hg17|chr5 (140994704-140994562) | |
| 178-320, gnl|Mm7|chr18 (38328814-38328672) | |
| 513-651, gnl|bosTau2|chr7 (35463469-35463331) | |
| 513-651, gnl|canFam2|chr2 (39439953-39440117) | |
| 513-651, gnl|danRer3|chr14 (9856632-9856770) | |
| 513-651, gnl|dasNov1|scaffold_60746 (7718-7583) | |
| 513-651, gnl|echTel1|scaffold_299377 (4305-4181) | |
| 513-651, gnl|fr1|chrUn (302604000-302604154) | |
| 513-651, gnl|galGal2|chr13 (7609318-7609173) | |
| 513-651, gnl|hg17|chr5 (140988923-140989087) | |
| 513-651, gnl|Hg17|chr5 (140989060-140988922) | |
| 513-651, gnl|loxAfr1|scaffold_40383 (9019-8858) | |
| 513-651, gnl|mm7|chr18 (38321092-38321256) | |
| 513-651, gnl|Mm7|chr18 (38321229-38321091) | |
| 513-651, gnl|monDom2|scaffold_6 (66975137-66974973) | |
| 513-651, gnl|oryCun1|scaffold_149941 (6085-6249) | |
| 513-651, gnl|panTro1|chr4 (147625013-147625177) | |
| 513-651, gnl|rheMac2|chr6 (138027272-138027436) | |
| 513-651, gnl|rn3|chr18 (30892274-30892438) | |
| 513-651, gnl|tetNig1|chrUn_random (135205280-135205137) | |
| 513-651, gnl|xenTro1|scaffold_15 (3587135-3586985) |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 178-320, gnl|bosTau2|chr7 (35466753-35466611) | |
| 178-320, gnl|Hg17|chr5 (140994704-140994562) | |
| 178-320, gnl|Mm7|chr18 (38328814-38328672) | |
| 513-651, gnl|bosTau2|chr7 (35463469-35463331) | |
| 513-651, gnl|canFam2|chr2 (39439953-39440117) | |
| 513-651, gnl|danRer3|chr14 (9856632-9856770) | |
| 513-651, gnl|dasNov1|scaffold_60746 (7718-7583) | |
| 513-651, gnl|echTel1|scaffold_299377 (4305-4181) | |
| 513-651, gnl|fr1|chrUn (302604000-302604154) | |
| 513-651, gnl|galGal2|chr13 (7609318-7609173) | |
| 513-651, gnl|hg17|chr5 (140988923-140989087) | |
| 513-651, gnl|Hg17|chr5 (140989060-140988922) | |
| 513-651, gnl|loxAfr1|scaffold_40383 (9019-8858) | |
| 513-651, gnl|mm7|chr18 (38321092-38321256) | |
| 513-651, gnl|Mm7|chr18 (38321229-38321091) | |
| 513-651, gnl|monDom2|scaffold_6 (66975137-66974973) | |
| 513-651, gnl|oryCun1|scaffold_149941 (6085-6249) | |
| 513-651, gnl|panTro1|chr4 (147625013-147625177) | |
| 513-651, gnl|rheMac2|chr6 (138027272-138027436) | |
| 513-651, gnl|rn3|chr18 (30892274-30892438) | |
| 513-651, gnl|tetNig1|chrUn_random (135205280-135205137) | |
| 513-651, gnl|xenTro1|scaffold_15 (3587135-3586985) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| jej (0.0989218) |