Non-Coding RNA Search

Ss1.1-uFN-UNL-P-FN-db-g-02-0-UNL.s1.3

Sequence:


               
               TGAACTTTTTATGTAGGAAGGCAATGAACGTTTTTTCCATTTCTGGCACTGATTTAAAAC
TTTTCGAAAAGACACAGTGTGTGCCTCCAACCATGCTTTTCACTGCTCTCGAATGTTAGG
GACAGGCCCGCCAACTTGTGTTTCAGGAGGTGCATCCCATCCGGGGCCAGACTGTAGGGA
GGCTGCTGAGAAGGCTGCAGCTTCGTGGCCCGCGGCCAGTTCCGCGGGAGATGGACTCAG
GAGCGCCCGCACTGCTGCTGCTGTCGCTACTCTGTCTCCCGCGCTGCGCTGTCGGCTGCC
CCGCCGCCTGCCGCTGCTACAGCGCCACGGTGGAGTGCGGCGCCCTGCGGCTGCGCGTGA
TCCCGCCTGGAATACCGCCTGGGACACAGGTGGGCACCTTGTGGGTTGCCGGGCTGCGGG
CCTCAAGTGCCAGTGACGTGGAGGGACGGGTGTGCGAGCCTTCCCGGTGGATAAATGGGG
CGCCCTGGGTGAGGACCTGCGGGTTGCCTGCCAGGCTTCCGGCTACCCCCAGCCCCTGGT
GACCTGGAGAAAGGTGGCCAGCCTCGTGGGGGGCGCTGCGGGCCAGGCCAACCAGAAGGT
GGGGTGCGGGCCAGGTGGCTCGGGGCTCGACACGGCAGCGCATGTCTTCTCACAACATAC
CTCGCCATGCGG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TGAACTTTTTATGTAGGAAGGCAATGAACGTTTTTTCCATTTCTGGCACTGATTTAAAAC
TTTTCGAAAAGACACAGTGTGTGCCTCCAACCATGCTTTTCACTGCTCTCGAATGTTAGG
GACAGGCCCGCCAACTTGTGTTTCAGGAGGTGCATCCCATCCGGGGCCAGACTGTAGGGA
GGCTGCTGAGAAGGCTGCAGCTTCGTGGCCCGCGGCCAGTTCCGCGGGAGATGGACTCAG
GAGCGCCCGCACTGCTGCTGCTGTCGCTACTCTGTCTCCCGCGCTGCGCTGTCGGCTGCC
CCGCCGCCTGCCGCTGCTACAGCGCCACGGTGGAGTGCGGCGCCCTGCGGCTGCGCGTGA
TCCCGCCTGGAATACCGCCTGGGACACAGGTGGGCACCTTGTGGGTTGCCGGGCTGCGGG
CCTCAAGTGCCAGTGACGTGGAGGGACGGGTGTGCGAGCCTTCCCGGTGGATAAATGGGG
CGCCCTGGGTGAGGACCTGCGGGTTGCCTGCCAGGCTTCCGGCTACCCCCAGCCCCTGGT
GACCTGGAGAAAGGTGGCCAGCCTCGTGGGGGGCGCTGCGGGCCAGGCCAACCAGAAGGT
GGGGTGCGGGCCAGGTGGCTCGGGGCTCGACACGGCAGCGCATGTCTTCTCACAACATAC
CTCGCCATGCGG

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

Help | Less info


               
               310-428, + strand, RNAz p=0.832823

Predicted RNA structure(s): 1 entry(ies)

Help | Less info

PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               310-428, + strand, RNAz p=0.832823

Aligned organism(s): 2 entry(ies)

More info

Aligned organism(s): 2 entry(ies)

Help | Less info


               
               5-489, gnl|bosTau2|chr14 (3240158-3240650)
               

               
               5-489, gnl|Hg17|chr8 (145721371-145720966)

Aligned organism(s): 2 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               5-489, gnl|bosTau2|chr14 (3240158-3240650)
               

               
               5-489, gnl|Hg17|chr8 (145721371-145720966)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

Help | Less info


               
               amn (0.417711)

Expressed library(ies): 1 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               amn (0.417711)

	5-489, gnl\|bosTau2\|chr14 (3240158-3240650)
	5-489, gnl\|Hg17\|chr8 (145721371-145720966)