Non-Coding RNA Search

Ss1.1-unkn-10-3_1D09.5

Sequence:


               
               ACAAATGGCATTATTTCATTCTCTTTCATGGTTGAGTGATATTCCATTGTAAATATGTAT
GACATCTTCTTTATCCATTCCTGATTTGATGGACATTTAGGTTGCTTCCATGTCTTGGCT
CTTACAAATAGTGCTGCAAGATCATTTGAATTTTGTGGTTTTATAATGCATCTTGAAATC
ATATAGTGATCGTTCTTCAACATTATTCTTTTTCAGAGTTGTTTTGGCTCATCTATGTCT
TTCTATTTCCATCTTAATTTTTGTATTGGCTTGTCAGTTTCTAAAAAGCCTTTTGAAATT
TTAAATGATTGCATTGAATCTATAGATAAATTGGGAAAAAAATTAAATTCTTAAAAATAT
TGTTTTGTTCAAGTCATGAATGATGCATATCTCCATTTACTTAGGTATCTCTTATTTTCA
TTAGTAATGTTTTGTCATTTTCTCTGTGTAGATGTTTCACATATTTTGTTAGATTATCAC
CATATTTTTTATATTTTATGCTATTGTAGGCAAATGTAAACATTTGTAATTTTTATTTCC
AAAGTCCTTGGCTAATATACAGAATTATAATAAAAGTTTTTTTATATTAATCTTAAAAAG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ACAAATGGCATTATTTCATTCTCTTTCATGGTTGAGTGATATTCCATTGTAAATATGTAT
GACATCTTCTTTATCCATTCCTGATTTGATGGACATTTAGGTTGCTTCCATGTCTTGGCT
CTTACAAATAGTGCTGCAAGATCATTTGAATTTTGTGGTTTTATAATGCATCTTGAAATC
ATATAGTGATCGTTCTTCAACATTATTCTTTTTCAGAGTTGTTTTGGCTCATCTATGTCT
TTCTATTTCCATCTTAATTTTTGTATTGGCTTGTCAGTTTCTAAAAAGCCTTTTGAAATT
TTAAATGATTGCATTGAATCTATAGATAAATTGGGAAAAAAATTAAATTCTTAAAAATAT
TGTTTTGTTCAAGTCATGAATGATGCATATCTCCATTTACTTAGGTATCTCTTATTTTCA
TTAGTAATGTTTTGTCATTTTCTCTGTGTAGATGTTTCACATATTTTGTTAGATTATCAC
CATATTTTTTATATTTTATGCTATTGTAGGCAAATGTAAACATTTGTAATTTTTATTTCC
AAAGTCCTTGGCTAATATACAGAATTATAATAAAAGTTTTTTTATATTAATCTTAAAAAG

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|56492562|emb|CAI01941.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|56492562|emb|CAI01941.1|

Aligned organism(s): 4 entry(ies)

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Aligned organism(s): 4 entry(ies)

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               1-146, gnl|bosTau2|chr10 (52152289-52152143)
               


               
               153-567, gnl|bosTau2|chr10 (37520173-37520576)
               

               
               153-567, gnl|Hg17|chr15 (58027535-58027119)
               


               
               160-508, gnl|bosTau2|chr10 (30472428-30472778)

Aligned organism(s): 4 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-146, gnl|bosTau2|chr10 (52152289-52152143)
               


               
               153-567, gnl|bosTau2|chr10 (37520173-37520576)
               

               
               153-567, gnl|Hg17|chr15 (58027535-58027119)
               


               
               160-508, gnl|bosTau2|chr10 (30472428-30472778)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               pla (0.133672)
               

               
               bla (0.124347)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               pla (0.133672)
               

               
               bla (0.124347)

	1-146, gnl\|bosTau2\|chr10 (52152289-52152143)

	153-567, gnl\|bosTau2\|chr10 (37520173-37520576)
	153-567, gnl\|Hg17\|chr15 (58027535-58027119)

	160-508, gnl\|bosTau2\|chr10 (30472428-30472778)