Ss1.1-unkn-10-3_2E08.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CTCATCTTTTGAGAAATGGGAGATTGAAAGAGGAATTGCTTCTGGAGTGCCATGGAGCTT ATACTCTGGACAGCAGCCATTTGATAGAACAGCTGAAAGATGGAAAGAAGATTTGCTTTT GGATGGCCATCACCGTTTTCCACCCAAGCTCCAGAAAGAGGCTTTTAGCAGAAGACAGAT TGGTGATGAATGTCAAGCAGGATTGAACCCTGAATTCCAAACTCTACTGGCACTTCAGTC TGGAGTAAATCAAGAAGAAGACAAGAAAGAGCGGCAAAAGCAGTACCTGAGATATAGACG ATTGTTCATGGATATTGAAAGAGAACAGGTGAAAGAACAACAAAGACAAAATGAACATAG GAAAAAAATTGAAAAAATTAAGAAAAAGAAAGAGCAGCAACGTTATGCTGAAGAGCAGAG GATATTAAGAATGAATTTTCATGAAGAGCCGTATTCAGGGGAGAAGATGAGTGAGATATT AGCCCAGCTACAACTTGAAGAAATAAAAGGAGCCAAAGAAAAACAACAGAAAGAAAAGGA ATACCAAAGATATGTAGAAGCTTTAAGAGCCCAGATTCAGGAGAAAATGCAGCTGTATAA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CTCATCTTTTGAGAAATGGGAGATTGAAAGAGGAATTGCTTCTGGAGTGCCATGGAGCTT ATACTCTGGACAGCAGCCATTTGATAGAACAGCTGAAAGATGGAAAGAAGATTTGCTTTT GGATGGCCATCACCGTTTTCCACCCAAGCTCCAGAAAGAGGCTTTTAGCAGAAGACAGAT TGGTGATGAATGTCAAGCAGGATTGAACCCTGAATTCCAAACTCTACTGGCACTTCAGTC TGGAGTAAATCAAGAAGAAGACAAGAAAGAGCGGCAAAAGCAGTACCTGAGATATAGACG ATTGTTCATGGATATTGAAAGAGAACAGGTGAAAGAACAACAAAGACAAAATGAACATAG GAAAAAAATTGAAAAAATTAAGAAAAAGAAAGAGCAGCAACGTTATGCTGAAGAGCAGAG GATATTAAGAATGAATTTTCATGAAGAGCCGTATTCAGGGGAGAAGATGAGTGAGATATT AGCCCAGCTACAACTTGAAGAAATAAAAGGAGCCAAAGAAAAACAACAGAAAGAAAAGGA ATACCAAAGATATGTAGAAGCTTTAAGAGCCCAGATTCAGGAGAAAATGCAGCTGTATAA |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 41 entry(ies) | More info |
| Aligned organism(s): 41 entry(ies) | Help | Less info |
| 55-178, gnl|bosTau2|chr29 (20646444-20646321) | |
| 55-178, gnl|canFam2|chr5 (12485107-12484902) | |
| 55-178, gnl|dasNov1|scaffold_220315 (642-843) | |
| 55-178, gnl|echTel1|scaffold_313351 (2513-2325) | |
| 55-178, gnl|hg17|chr11 (124369196-124369400) | |
| 55-178, gnl|Hg17|chr11 (124369256-124369379) | |
| 55-178, gnl|loxAfr1|scaffold_15553 (63831-63626) | |
| 55-178, gnl|mm7|chr9 (37240096-37239921) | |
| 55-178, gnl|Mm7|chr9 (37240047-37239936) | |
| 55-178, gnl|monDom2|scaffold_15 (10711908-10712121) | |
| 55-178, gnl|oryCun1|scaffold_154657 (22199-22399) | |
| 55-178, gnl|panTro1|chr9 (126452454-126452658) | |
| 55-178, gnl|rheMac2|chr14 (123134810-123135018) | |
| 55-178, gnl|rn3|chr8 (38581655-38581479) | |
| 270-375, gnl|bosTau2|chr29 (20639369-20639264) | |
| 270-375, gnl|canFam2|chr5 (12476714-12476468) | |
| 270-375, gnl|dasNov1|scaffold_2862 (103226-102981) | |
| 270-375, gnl|echTel1|scaffold_108659 (710-937) | |
| 270-375, gnl|hg17|chr11 (124380145-124380391) | |
| 270-375, gnl|Hg17|chr11 (124380213-124380318) | |
| 270-375, gnl|loxAfr1|scaffold_207856 (398-645) | |
| 270-375, gnl|mm7|chr9 (37231664-37231452) | |
| 270-375, gnl|Mm7|chr9 (37231603-37231498) | |
| 270-375, gnl|monDom2|scaffold_15 (10721006-10721253) | |
| 270-375, gnl|oryCun1|scaffold_136890 (14647-14404) | |
| 270-375, gnl|panTro1|chr9 (126463363-126463609) | |
| 270-375, gnl|rheMac2|chr14 (123146051-123146296) | |
| 270-375, gnl|rn3|chr8 (38572698-38572483) | |
| 376-552, gnl|bosTau2|chr29 (20620102-20619923) | |
| 376-552, gnl|canFam2|chr5 (12429746-12429462) | |
| 376-552, gnl|dasNov1|scaffold_75719 (3580-3266) | |
| 376-552, gnl|echTel1|scaffold_277741 (50848-50566) | |
| 376-552, gnl|hg17|chr11 (124413464-124413775) | |
| 376-552, gnl|Hg17|chr11 (124413537-124413713) | |
| 376-552, gnl|loxAfr1|scaffold_2177 (77200-76910) | |
| 376-552, gnl|mm7|chr9 (37208442-37208128) | |
| 376-552, gnl|Mm7|chr9 (37208368-37208189) | |
| 376-552, gnl|oryCun1|scaffold_99705 (4470-4156) | |
| 376-552, gnl|panTro1|chr9 (126496810-126497121) | |
| 376-552, gnl|rheMac2|chr14 (123188693-123189008) | |
| 376-552, gnl|rn3|chr8 (38545903-38545592) |
| Aligned organism(s): 41 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 55-178, gnl|bosTau2|chr29 (20646444-20646321) | |
| 55-178, gnl|canFam2|chr5 (12485107-12484902) | |
| 55-178, gnl|dasNov1|scaffold_220315 (642-843) | |
| 55-178, gnl|echTel1|scaffold_313351 (2513-2325) | |
| 55-178, gnl|hg17|chr11 (124369196-124369400) | |
| 55-178, gnl|Hg17|chr11 (124369256-124369379) | |
| 55-178, gnl|loxAfr1|scaffold_15553 (63831-63626) | |
| 55-178, gnl|mm7|chr9 (37240096-37239921) | |
| 55-178, gnl|Mm7|chr9 (37240047-37239936) | |
| 55-178, gnl|monDom2|scaffold_15 (10711908-10712121) | |
| 55-178, gnl|oryCun1|scaffold_154657 (22199-22399) | |
| 55-178, gnl|panTro1|chr9 (126452454-126452658) | |
| 55-178, gnl|rheMac2|chr14 (123134810-123135018) | |
| 55-178, gnl|rn3|chr8 (38581655-38581479) | |
| 270-375, gnl|bosTau2|chr29 (20639369-20639264) | |
| 270-375, gnl|canFam2|chr5 (12476714-12476468) | |
| 270-375, gnl|dasNov1|scaffold_2862 (103226-102981) | |
| 270-375, gnl|echTel1|scaffold_108659 (710-937) | |
| 270-375, gnl|hg17|chr11 (124380145-124380391) | |
| 270-375, gnl|Hg17|chr11 (124380213-124380318) | |
| 270-375, gnl|loxAfr1|scaffold_207856 (398-645) | |
| 270-375, gnl|mm7|chr9 (37231664-37231452) | |
| 270-375, gnl|Mm7|chr9 (37231603-37231498) | |
| 270-375, gnl|monDom2|scaffold_15 (10721006-10721253) | |
| 270-375, gnl|oryCun1|scaffold_136890 (14647-14404) | |
| 270-375, gnl|panTro1|chr9 (126463363-126463609) | |
| 270-375, gnl|rheMac2|chr14 (123146051-123146296) | |
| 270-375, gnl|rn3|chr8 (38572698-38572483) | |
| 376-552, gnl|bosTau2|chr29 (20620102-20619923) | |
| 376-552, gnl|canFam2|chr5 (12429746-12429462) | |
| 376-552, gnl|dasNov1|scaffold_75719 (3580-3266) | |
| 376-552, gnl|echTel1|scaffold_277741 (50848-50566) | |
| 376-552, gnl|hg17|chr11 (124413464-124413775) | |
| 376-552, gnl|Hg17|chr11 (124413537-124413713) | |
| 376-552, gnl|loxAfr1|scaffold_2177 (77200-76910) | |
| 376-552, gnl|mm7|chr9 (37208442-37208128) | |
| 376-552, gnl|Mm7|chr9 (37208368-37208189) | |
| 376-552, gnl|oryCun1|scaffold_99705 (4470-4156) | |
| 376-552, gnl|panTro1|chr9 (126496810-126497121) | |
| 376-552, gnl|rheMac2|chr14 (123188693-123189008) | |
| 376-552, gnl|rn3|chr8 (38545903-38545592) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| tes (0.207814) |