Non-Coding RNA Search

Ss1.1-unkn-16E01.5

Sequence:


               
               TTCCTAATGGAGTAGCCTAGAGCCATGAAATTTTTTCATATTCAGTTTTTCACATTGGTA
ACATTTATTTTCTCTAACATGGCTCTAGCTCATAATGACCTGGATTCTGCTGCTAAAACA
TCACCTTAAGAGAGCAGGGAGCCTTGTGTATTATGGAAGTGACACTCCATTTGAGATTCT
AATTTTATATCACCACAGCAATAGTATTGAAAGTGACATGACCATTGTCATTTGCCTAGA
TTCCATGCCCCAGACCCAGAAGTACATTTTGCAAGAAGATTGGGATACTAATTAAAAAAA
AAACACATTGGTGAAGAGAAGGAAATGTTTGAAGAAGGAAGTGGGTTAGCTCAGGAAATG
AATAACTGCCTCTAGAGGAGTCTCTTCTGTCTGTGACTTTGGTTTTTCTTTCTGTGGGTG
CTTTGAGAAAAGATACCTTGAGAAGTCTGTTTGAGGTCTATCAAGCACCCCAAATACATT
TTAGTAGAAAGACATTTGTAGGCATGAGGGAGTGGGTTGGACTGGGAGTTTGTGATTAGT
AGGTGCAAACTATAAATTTAGAGTGGATAAACAAGGTCCTACTGCATAGCACAAGGAACT
GAATCCAATCTCTTTGATAGAATATGTTAGGGGATGATGTGAGAAAACATTTATATATAT
ATAAATATATTTATGATATATATA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTCCTAATGGAGTAGCCTAGAGCCATGAAATTTTTTCATATTCAGTTTTTCACATTGGTA
ACATTTATTTTCTCTAACATGGCTCTAGCTCATAATGACCTGGATTCTGCTGCTAAAACA
TCACCTTAAGAGAGCAGGGAGCCTTGTGTATTATGGAAGTGACACTCCATTTGAGATTCT
AATTTTATATCACCACAGCAATAGTATTGAAAGTGACATGACCATTGTCATTTGCCTAGA
TTCCATGCCCCAGACCCAGAAGTACATTTTGCAAGAAGATTGGGATACTAATTAAAAAAA
AAACACATTGGTGAAGAGAAGGAAATGTTTGAAGAAGGAAGTGGGTTAGCTCAGGAAATG
AATAACTGCCTCTAGAGGAGTCTCTTCTGTCTGTGACTTTGGTTTTTCTTTCTGTGGGTG
CTTTGAGAAAAGATACCTTGAGAAGTCTGTTTGAGGTCTATCAAGCACCCCAAATACATT
TTAGTAGAAAGACATTTGTAGGCATGAGGGAGTGGGTTGGACTGGGAGTTTGTGATTAGT
AGGTGCAAACTATAAATTTAGAGTGGATAAACAAGGTCCTACTGCATAGCACAAGGAACT
GAATCCAATCTCTTTGATAGAATATGTTAGGGGATGATGTGAGAAAACATTTATATATAT
ATAAATATATTTATGATATATATA

Aligned organism(s): 4 entry(ies)

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Aligned organism(s): 4 entry(ies)

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               1-488, gnl|bosTau2|chr8 (26031312-26030829)
               

               
               1-488, gnl|Hg17|chr9 (74992021-74992498)
               

               
               1-488, gnl|Mm7|chr19 (18281251-18279964)
               


               
               506-684, gnl|bosTau2|chr9 (8562882-8562701)

Aligned organism(s): 4 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-488, gnl|bosTau2|chr8 (26031312-26030829)
               

               
               1-488, gnl|Hg17|chr9 (74992021-74992498)
               

               
               1-488, gnl|Mm7|chr19 (18281251-18279964)
               


               
               506-684, gnl|bosTau2|chr9 (8562882-8562701)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               pgl (0.118483)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               pgl (0.118483)

	1-488, gnl\|bosTau2\|chr8 (26031312-26030829)
	1-488, gnl\|Hg17\|chr9 (74992021-74992498)
	1-488, gnl\|Mm7\|chr19 (18281251-18279964)

	506-684, gnl\|bosTau2\|chr9 (8562882-8562701)