Non-Coding RNA Search

Ss1.1-unkn-61A01.5

Sequence:


               
               TAAAATATTACACAAAGATGCTATAGATGAATGAGAAAACACCGTAGGTGTGGTTAGTAC
TGTTAGCAGCTGTGATATTAATAATAACTTTGAATCTTTTCATATCATGGTTTTAGTTAC
AGTGAAATATTAGTTGATATTTATTTCCTTTTTTTTAAAAAAAATCACTTTTGCATCTTG
ATCTCCTTTCCATTTGAACTCAAGAGTTTGTAGTGATTTTTTTTTTTAGTAAAGTTGTAT
TTTCTCTGTAGGAATACTTCTTTGATTCCAGAGTACTAACAGATGGAGAACTGGCTCCCA
ATGATCGATGTTGCCGTGTGTGTGGAAAAATCGGTCACTACATGAAAGACTGCCCTAAAA
GGAGAAGGTTGGCAAATGATTGTGTATCAATATTACAGGGAAAATAAACATGAGGCAAAT
TGAAGCTATAACTTGTTCAAGTATGTTTAAGTTGAAAAAGTTCAGGGCTTTCTTTGCACC
TTAGGTAGATATATATTTGAGTGGCATTTTGTGGAACAGGGAGATTTATTTTGGGTATAA
TTATGTTTCATGAGGTTTATTTTATTTTTTCTTTTATTCATTAATTCATTCAGTTTTTTT
TCTTAATTGAGGAAGCATTTATTAACACCTACTGTGTGCTGGGAACTGTGCTAGGAGTCA
AAGGGAAAAAAAGACCAAGTTAAGAGGTTTTTGCTGAGGACCTCACAGTTGTAAAAACCA
GTAATTAAAATTAACTGAATCTCTGAGGTATATGCTGTGAAGTATACATATAATATATAC
CTTAAAAAATGTACATTCTCTATGCTCCCTGAAAATATATCTATGAAACAGACTTTACTG
TTGTTCTGTGTACTATGTTAATAGGACAGAATGATGGCCTCTTGATGACTTCTTAAGTCA
TCAAATCTTGCTTAATATAAAAAGCTTTGAACTTTTCAGACAGAACAAACTCCTAGTTTC
CATCACTGCTATTTATTACATTTGAGCAAGACACTTAGCCTTCTCTAAACCTCAAGTTTC
TTCCTCTGTAAAATGGAGATGATA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TAAAATATTACACAAAGATGCTATAGATGAATGAGAAAACACCGTAGGTGTGGTTAGTAC
TGTTAGCAGCTGTGATATTAATAATAACTTTGAATCTTTTCATATCATGGTTTTAGTTAC
AGTGAAATATTAGTTGATATTTATTTCCTTTTTTTTAAAAAAAATCACTTTTGCATCTTG
ATCTCCTTTCCATTTGAACTCAAGAGTTTGTAGTGATTTTTTTTTTTAGTAAAGTTGTAT
TTTCTCTGTAGGAATACTTCTTTGATTCCAGAGTACTAACAGATGGAGAACTGGCTCCCA
ATGATCGATGTTGCCGTGTGTGTGGAAAAATCGGTCACTACATGAAAGACTGCCCTAAAA
GGAGAAGGTTGGCAAATGATTGTGTATCAATATTACAGGGAAAATAAACATGAGGCAAAT
TGAAGCTATAACTTGTTCAAGTATGTTTAAGTTGAAAAAGTTCAGGGCTTTCTTTGCACC
TTAGGTAGATATATATTTGAGTGGCATTTTGTGGAACAGGGAGATTTATTTTGGGTATAA
TTATGTTTCATGAGGTTTATTTTATTTTTTCTTTTATTCATTAATTCATTCAGTTTTTTT
TCTTAATTGAGGAAGCATTTATTAACACCTACTGTGTGCTGGGAACTGTGCTAGGAGTCA
AAGGGAAAAAAAGACCAAGTTAAGAGGTTTTTGCTGAGGACCTCACAGTTGTAAAAACCA
GTAATTAAAATTAACTGAATCTCTGAGGTATATGCTGTGAAGTATACATATAATATATAC
CTTAAAAAATGTACATTCTCTATGCTCCCTGAAAATATATCTATGAAACAGACTTTACTG
TTGTTCTGTGTACTATGTTAATAGGACAGAATGATGGCCTCTTGATGACTTCTTAAGTCA
TCAAATCTTGCTTAATATAAAAAGCTTTGAACTTTTCAGACAGAACAAACTCCTAGTTTC
CATCACTGCTATTTATTACATTTGAGCAAGACACTTAGCCTTCTCTAAACCTCAAGTTTC
TTCCTCTGTAAAATGGAGATGATA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               6-423, gnl|bosTau2|chr3 (63008952-63009381)
               

               
               6-423, gnl|Hg17|chr1 (52616275-52615857)
               

               
               6-423, gnl|Mm7|chr4 (107924090-107924665)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               6-423, gnl|bosTau2|chr3 (63008952-63009381)
               

               
               6-423, gnl|Hg17|chr1 (52616275-52615857)
               

               
               6-423, gnl|Mm7|chr4 (107924090-107924665)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               liv (0.146284)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               liv (0.146284)

	6-423, gnl\|bosTau2\|chr3 (63008952-63009381)
	6-423, gnl\|Hg17\|chr1 (52616275-52615857)
	6-423, gnl\|Mm7\|chr4 (107924090-107924665)