Non-Coding RNA Search

Ss1.1-unkn-AR045G05LN30NG05S.5

Sequence:


               
               CTGGGAGACTCTTTTTAAGTGGAGAGCTGTCTCTTTTCTGACCAGACTGGGGTGTGTGGC
GTCCGCAGGTCAGTTAGCTTAGTGAGACGCTGATGTCAGGTGGTTCTTCCACTGGCTGTG
CTGAAGGGCCAGGAAGGTCTTTTTAGAACCAGCGTCTAGATTCCCCCTTCTCTCCTTATT
CCCCTTCCATTTCCACTCCCCCTTTATTTATTTGTTTTCTAATTAGGGGCCAAGTCTGTC
AAGTTTTTTGTCAAACTGAGCTAAAAGGTCTTTTGTTATACTATTTGTGTTTACCTGCGT
TGGGAGATAGGGTCGTTTTTTCGTGAAGGTGTGTGTGTTTGGCACCAA------------
GCCCCATGTTGCTGACTTGAGCAT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CTGGGAGACTCTTTTTAAGTGGAGAGCTGTCTCTTTTCTGACCAGACTGGGGTGTGTGGC
GTCCGCAGGTCAGTTAGCTTAGTGAGACGCTGATGTCAGGTGGTTCTTCCACTGGCTGTG
CTGAAGGGCCAGGAAGGTCTTTTTAGAACCAGCGTCTAGATTCCCCCTTCTCTCCTTATT
CCCCTTCCATTTCCACTCCCCCTTTATTTATTTGTTTTCTAATTAGGGGCCAAGTCTGTC
AAGTTTTTTGTCAAACTGAGCTAAAAGGTCTTTTGTTATACTATTTGTGTTTACCTGCGT
TGGGAGATAGGGTCGTTTTTTCGTGAAGGTGTGTGTGTTTGGCACCAA------------
GCCCCATGTTGCTGACTTGAGCAT

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               2-347, gnl|bosTau2|chr14 (42878135-42877797)
               

               
               2-347, gnl|Hg17|chr8 (96010184-96009848)
               

               
               2-347, gnl|Mm7|chr4 (11098717-11098996)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               2-347, gnl|bosTau2|chr14 (42878135-42877797)
               

               
               2-347, gnl|Hg17|chr8 (96010184-96009848)
               

               
               2-347, gnl|Mm7|chr4 (11098717-11098996)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               lun (0.150489)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               lun (0.150489)

	2-347, gnl\|bosTau2\|chr14 (42878135-42877797)
	2-347, gnl\|Hg17\|chr8 (96010184-96009848)
	2-347, gnl\|Mm7\|chr4 (11098717-11098996)