Non-Coding RNA Search

Ss1.1-unkn-AR078D09iTHYED09S.5

Sequence:


               
               CCACTGAGCCACAGTGGGAAATCCCAAAAGTTTTTCTATAGATAAAAATACAGGCGGAGG
ACATGAGTGGGGGGCCGGTGTCGGTGGGTGCCTGTTCTGGGAAGACCTCACTGGGTTCTG
CTTAGTTACGGCTTAAGATTTACATTTTGTTGGAGGAAAGAGGAAGTAAATTGGAGAAGG
AAATGTTGAGGACACAAGTAAGTACGGTCCACAGAAATTCTGTTTGCCTAAGAGGAGATA
GAGATACCGAGTAAAAGAAATACTCACTTCCGCATAATTTTGCCTCAGGCAGGTAGAGGG
AGGAAAAGGAACGAACGTTACAGGACCCTGGGTTCTTCAGCCTCCGGCATCATGTTGAAT
GACTCAGCCCAGTGTCTGGACTCTCTGAGGTTCAGGTTCTTCATGCCTCCGTGCAGAAGG
AATTCAGCAAGAGACAAAGTGATAGGCAAGAAATAGATTTATTAGGATAGGATGCCTGTG
AGACATGCAGGCGGGCAGGCAAGGAGACTCAGCCTCAAGAATCCCGTGGGCTACAGTTTT
ATCCTCCAGGGGGAGTGGGGGTTGGAAAAACCCACCTCTTCCTTTCTGGGAGTAGCAGCC
TCCTCCTCAGTATTCCGGTAAGGTGTATTCAAATCAGCAGAAGGCCAGGGATGCGGCCCT
CAAAAAGGCAGAAGGGTGGTCCTCAAACTCCTGCCCTTGGTCTGAATCTGAATGAAGACC
TCATCCCATCCCCCAGCCAAGGACCTAAGGCTATTCTTGCACTTCCACTCGTCAAGCAAG
CCTGCCTTGTTCTGATGGTTTTGAGCAATTTATTTACTTACAGTGATCTCCCAATATCCT
CTAAGTTTCCCTCATTATCCCCCGTGGTCCTTTATCGGGATTTCTAAAACTACCCGTGCC
TACTCCATCCCTATCACCCTTAGGGTTATCCTAAGGATTAAATGACACCAGGTAGGGGAA
AGCAGTCCTCAGACAAATATCGAG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CCACTGAGCCACAGTGGGAAATCCCAAAAGTTTTTCTATAGATAAAAATACAGGCGGAGG
ACATGAGTGGGGGGCCGGTGTCGGTGGGTGCCTGTTCTGGGAAGACCTCACTGGGTTCTG
CTTAGTTACGGCTTAAGATTTACATTTTGTTGGAGGAAAGAGGAAGTAAATTGGAGAAGG
AAATGTTGAGGACACAAGTAAGTACGGTCCACAGAAATTCTGTTTGCCTAAGAGGAGATA
GAGATACCGAGTAAAAGAAATACTCACTTCCGCATAATTTTGCCTCAGGCAGGTAGAGGG
AGGAAAAGGAACGAACGTTACAGGACCCTGGGTTCTTCAGCCTCCGGCATCATGTTGAAT
GACTCAGCCCAGTGTCTGGACTCTCTGAGGTTCAGGTTCTTCATGCCTCCGTGCAGAAGG
AATTCAGCAAGAGACAAAGTGATAGGCAAGAAATAGATTTATTAGGATAGGATGCCTGTG
AGACATGCAGGCGGGCAGGCAAGGAGACTCAGCCTCAAGAATCCCGTGGGCTACAGTTTT
ATCCTCCAGGGGGAGTGGGGGTTGGAAAAACCCACCTCTTCCTTTCTGGGAGTAGCAGCC
TCCTCCTCAGTATTCCGGTAAGGTGTATTCAAATCAGCAGAAGGCCAGGGATGCGGCCCT
CAAAAAGGCAGAAGGGTGGTCCTCAAACTCCTGCCCTTGGTCTGAATCTGAATGAAGACC
TCATCCCATCCCCCAGCCAAGGACCTAAGGCTATTCTTGCACTTCCACTCGTCAAGCAAG
CCTGCCTTGTTCTGATGGTTTTGAGCAATTTATTTACTTACAGTGATCTCCCAATATCCT
CTAAGTTTCCCTCATTATCCCCCGTGGTCCTTTATCGGGATTTCTAAAACTACCCGTGCC
TACTCCATCCCTATCACCCTTAGGGTTATCCTAAGGATTAAATGACACCAGGTAGGGGAA
AGCAGTCCTCAGACAAATATCGAG

Aligned organism(s): 2 entry(ies)

More info

Aligned organism(s): 2 entry(ies)

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               132-366, gnl|bosTau2|chr10 (16758686-16758459)
               

               
               132-366, gnl|Hg17|chr14 (20312129-20312708)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               132-366, gnl|bosTau2|chr10 (16758686-16758459)
               

               
               132-366, gnl|Hg17|chr14 (20312129-20312708)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               ill (0.175593)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ill (0.175593)

	132-366, gnl\|bosTau2\|chr10 (16758686-16758459)
	132-366, gnl\|Hg17\|chr14 (20312129-20312708)