Ss1.1-unkn-AR081A05BMBA05S.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| AGGAATTCGGCACCAGGGACAGTTTTTAAACTTTCTAAAGAACGCGAACGTCTTCAAGCA ATGATGACCCACTTGCACATGCGACCCTCAGAGCCCAAACCATCTCCCAAACCTCTAAAT CTGGTGTCTAGTGTCACCATGTCGAAGAACATGTTGGAGACATCCCCACAGAGCTTACCT CAAACCCCTACCACACCAACGGCCCCAGTCACCCCGATTACCCAGGGACCCTCAGTAATC ACCCCAGCCAGTGTGCCCAATGTGGGAGCCATACGAAGGCGACATTCAGACAAATACAAC ATTCCCATGTCATCAGAAATTGCCCCAAACTACGAGTTTTATAAAAATGCAGATGTCAGA CCTCCCTTTACTTATGCAACTCTCATAAGGCAGGCTATCATGGAGTCATCTGACAGGCAG TTAACACTTAATGAAATTTACAGCTGGTTTACACGGACATTTGCTTACTTCAGGCGGAAT GCGGCAACTTGGAAGAATGCGGTACGTCATAATCTCAGCCTGCACAAG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| AGGAATTCGGCACCAGGGACAGTTTTTAAACTTTCTAAAGAACGCGAACGTCTTCAAGCA ATGATGACCCACTTGCACATGCGACCCTCAGAGCCCAAACCATCTCCCAAACCTCTAAAT CTGGTGTCTAGTGTCACCATGTCGAAGAACATGTTGGAGACATCCCCACAGAGCTTACCT CAAACCCCTACCACACCAACGGCCCCAGTCACCCCGATTACCCAGGGACCCTCAGTAATC ACCCCAGCCAGTGTGCCCAATGTGGGAGCCATACGAAGGCGACATTCAGACAAATACAAC ATTCCCATGTCATCAGAAATTGCCCCAAACTACGAGTTTTATAAAAATGCAGATGTCAGA CCTCCCTTTACTTATGCAACTCTCATAAGGCAGGCTATCATGGAGTCATCTGACAGGCAG TTAACACTTAATGAAATTTACAGCTGGTTTACACGGACATTTGCTTACTTCAGGCGGAAT GCGGCAACTTGGAAGAATGCGGTACGTCATAATCTCAGCCTGCACAAG |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 22 entry(ies) | More info |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
| 115-316, gnl|bosTau2|chr22 (24775386-24775587) | |
| 115-316, gnl|Hg17|chr3 (71109870-71109669) | |
| 115-316, gnl|Mm7|chr6 (99033810-99033609) | |
| 391-495, gnl|bosTau2|chr4 (30759807-30759703) | |
| 391-495, gnl|canFam2|chr14 (56794357-56794699) | |
| 391-495, gnl|danRer3|chrUn (6927262-6927592) | |
| 391-495, gnl|dasNov1|scaffold_134 (148644-148303) | |
| 391-495, gnl|echTel1|scaffold_297732 (85794-86135) | |
| 391-495, gnl|fr1|chrUn (206253353-206253707) | |
| 391-495, gnl|galGal2|chr1 (22913114-22912766) | |
| 391-495, gnl|hg17|chr7 (113893347-113893688) | |
| 391-495, gnl|Hg17|chr7 (113893575-113893679) | |
| 391-495, gnl|loxAfr1|scaffold_2556 (5868-5528) | |
| 391-495, gnl|mm7|chr6 (15352730-15353079) | |
| 391-495, gnl|Mm7|chr6 (15352959-15353063) | |
| 391-495, gnl|monDom2|scaffold_22 (35109350-35109008) | |
| 391-495, gnl|oryCun1|scaffold_203697 (166318-166659) | |
| 391-495, gnl|panTro1|chr6 (115949961-115950302) | |
| 391-495, gnl|rheMac2|chr3 (152002876-152003217) | |
| 391-495, gnl|rn3|chr4 (41062201-41062550) | |
| 391-495, gnl|tetNig1|chr19 (4400715-4400354) | |
| 391-495, gnl|xenTro1|scaffold_17 (1143662-1143990) |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 115-316, gnl|bosTau2|chr22 (24775386-24775587) | |
| 115-316, gnl|Hg17|chr3 (71109870-71109669) | |
| 115-316, gnl|Mm7|chr6 (99033810-99033609) | |
| 391-495, gnl|bosTau2|chr4 (30759807-30759703) | |
| 391-495, gnl|canFam2|chr14 (56794357-56794699) | |
| 391-495, gnl|danRer3|chrUn (6927262-6927592) | |
| 391-495, gnl|dasNov1|scaffold_134 (148644-148303) | |
| 391-495, gnl|echTel1|scaffold_297732 (85794-86135) | |
| 391-495, gnl|fr1|chrUn (206253353-206253707) | |
| 391-495, gnl|galGal2|chr1 (22913114-22912766) | |
| 391-495, gnl|hg17|chr7 (113893347-113893688) | |
| 391-495, gnl|Hg17|chr7 (113893575-113893679) | |
| 391-495, gnl|loxAfr1|scaffold_2556 (5868-5528) | |
| 391-495, gnl|mm7|chr6 (15352730-15353079) | |
| 391-495, gnl|Mm7|chr6 (15352959-15353063) | |
| 391-495, gnl|monDom2|scaffold_22 (35109350-35109008) | |
| 391-495, gnl|oryCun1|scaffold_203697 (166318-166659) | |
| 391-495, gnl|panTro1|chr6 (115949961-115950302) | |
| 391-495, gnl|rheMac2|chr3 (152002876-152003217) | |
| 391-495, gnl|rn3|chr4 (41062201-41062550) | |
| 391-495, gnl|tetNig1|chr19 (4400715-4400354) | |
| 391-495, gnl|xenTro1|scaffold_17 (1143662-1143990) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| eye (0.170503) |