Ss1.1-unkn-AR085F04PBCAF04S.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| TCGAATTGGAGAGCTCACTTTGCCCAGCTCCGGACCTGCCTGCCGGCTCTCCCGGGATGA ATGGGAGCTGCCAGGGAGTAGGTGCGGAAGAAGGGGCGCCAAGAAAGAGTGGTCTAGTAG GGCTGGCGATGACACCGGCGTGAGTGCCCTCCTCTGCTCTTCACCCGAGGAGGCCAGCTG CACATCAGCCTTCCAAGGATTTTCTCTCTGCGCTATGGGAGATGTCAAAGAATCAAAAAT GCAGATAACACCTGAAACTCCAGGAAGGATCCCTGTTTTAAATCCTTTCGAAAGTCCTGG TGATTATTCTAGTCTCCATGAACAAACTCTCTCCAGTCCTTCTGTTTTTAAATCGACAAA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| TCGAATTGGAGAGCTCACTTTGCCCAGCTCCGGACCTGCCTGCCGGCTCTCCCGGGATGA ATGGGAGCTGCCAGGGAGTAGGTGCGGAAGAAGGGGCGCCAAGAAAGAGTGGTCTAGTAG GGCTGGCGATGACACCGGCGTGAGTGCCCTCCTCTGCTCTTCACCCGAGGAGGCCAGCTG CACATCAGCCTTCCAAGGATTTTCTCTCTGCGCTATGGGAGATGTCAAAGAATCAAAAAT GCAGATAACACCTGAAACTCCAGGAAGGATCCCTGTTTTAAATCCTTTCGAAAGTCCTGG TGATTATTCTAGTCTCCATGAACAAACTCTCTCCAGTCCTTCTGTTTTTAAATCGACAAA |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 200-360, - strand, RNAz p=0.794239 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 200-360, - strand, RNAz p=0.794239 |
| Predicted microRNA(s): 1 entry(ies) | More info |
| Predicted microRNA(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted microRNA,
PigEST conread reading direction of prediction,
miRNA classificator p of RNAmicro
PigEST conread reading direction of prediction,
miRNA classificator p of RNAmicro
| 230-333, - strand, RNAmicro p=0.999591 |
| Aligned organism(s): 5 entry(ies) | More info |
| Aligned organism(s): 5 entry(ies) | Help | Less info |
| 1-199, gnl|bosTau2|chr12 (21798473-21798275) | |
| 1-199, gnl|Hg17|chr13 (72200187-72200369) | |
| 200-360, gnl|bosTau2|chr12 (21797232-21797073) | |
| 200-360, gnl|Hg17|chr13 (72201066-72201225) | |
| 200-360, gnl|Mm7|chr14 (93447754-93447913) |
| Aligned organism(s): 5 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-199, gnl|bosTau2|chr12 (21798473-21798275) | |
| 1-199, gnl|Hg17|chr13 (72200187-72200369) | |
| 200-360, gnl|bosTau2|chr12 (21797232-21797073) | |
| 200-360, gnl|Hg17|chr13 (72201066-72201225) | |
| 200-360, gnl|Mm7|chr14 (93447754-93447913) |
| Expressed library(ies): 2 entry(ies) | More info |
| Expressed library(ies): 2 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| cbl (0.114797) | |
| cty (0.10408) |