Non-Coding RNA Search

Ss1.1-unkn-LZV602768361.R1.5

Sequence:


               
               GAGAGAACTAGAGCTAAATTAAAAGCAAGAGCTCTGGAGACAAAGTACCTAGTTTTGCAT
TCTAGTTGTATGATTTTGGTCAAATAATTAAACTTCCCTATGACTTAGTTTTTTTTTTTT
CTTTTGTAAATCATGAATAATAAGGGATCTCATAACCTCATAGGGTTATTGGGAAAATTA
AGTGAAATAAACTACATGAAGGTCCCTAAAACAGTATGTCTGGGGTTGGCTATGTTTAAT
TATTAATATACCACTGGCATGTATCTATAATCAATAAATGGGAGTGCATTAAAAAATATT
GTTTGAAAAAAAAAGGCACATGTACAGTGTATGTTCTGCCTTAGCTAACAAATGCTAGGT
TTGGTAAATACCATTAGCTACTTGTTTGTTGGAGCTCAAAGAGCCTTTACCACTTAAGGT
TGTTTTCTTTACTGTTATTATAAGAAAATAATTGTCATGCTCAAGTCATATCTGTCTCCT
CACTTCCCCCTAGGTGACCATGCTTTGGGATTTTCATAGTTTGAGTAATTCCTCCGGGCT
CTGCCACCCAGCAAGTTAAAGAGGACAAGATTCCTCACTGGGGGTTGTGGTTCTGGGAAT
GTGAGCAGCTTGTTTTCATGAATTCTGCACCCTGACCTGGCCTACTGTTAGGAGCTGTTG
TGTTGGTAGTGGCGGTGTTTTTAGTTATTTCCTCCACCTTCCACAGTTACTTGTATATAA
AGATTTTTGAAAAGTGAATGTTTTATGGGGATGTTTTGCTTATGCAAC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GAGAGAACTAGAGCTAAATTAAAAGCAAGAGCTCTGGAGACAAAGTACCTAGTTTTGCAT
TCTAGTTGTATGATTTTGGTCAAATAATTAAACTTCCCTATGACTTAGTTTTTTTTTTTT
CTTTTGTAAATCATGAATAATAAGGGATCTCATAACCTCATAGGGTTATTGGGAAAATTA
AGTGAAATAAACTACATGAAGGTCCCTAAAACAGTATGTCTGGGGTTGGCTATGTTTAAT
TATTAATATACCACTGGCATGTATCTATAATCAATAAATGGGAGTGCATTAAAAAATATT
GTTTGAAAAAAAAAGGCACATGTACAGTGTATGTTCTGCCTTAGCTAACAAATGCTAGGT
TTGGTAAATACCATTAGCTACTTGTTTGTTGGAGCTCAAAGAGCCTTTACCACTTAAGGT
TGTTTTCTTTACTGTTATTATAAGAAAATAATTGTCATGCTCAAGTCATATCTGTCTCCT
CACTTCCCCCTAGGTGACCATGCTTTGGGATTTTCATAGTTTGAGTAATTCCTCCGGGCT
CTGCCACCCAGCAAGTTAAAGAGGACAAGATTCCTCACTGGGGGTTGTGGTTCTGGGAAT
GTGAGCAGCTTGTTTTCATGAATTCTGCACCCTGACCTGGCCTACTGTTAGGAGCTGTTG
TGTTGGTAGTGGCGGTGTTTTTAGTTATTTCCTCCACCTTCCACAGTTACTTGTATATAA
AGATTTTTGAAAAGTGAATGTTTTATGGGGATGTTTTGCTTATGCAAC

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

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               4-767, gnl|bosTau2|chr9 (20037480-20036712)
               

               
               4-767, gnl|Hg17|chr6 (111930430-111931477)
               

               
               4-767, gnl|Mm7|chr10 (39491732-39490790)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               4-767, gnl|bosTau2|chr9 (20037480-20036712)
               

               
               4-767, gnl|Hg17|chr6 (111930430-111931477)
               

               
               4-767, gnl|Mm7|chr10 (39491732-39490790)

Expressed library(ies): 3 entry(ies)

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Expressed library(ies): 3 entry(ies)

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               eye (0.170503)
               

               
               lin (0.145603)
               

               
               thg (0.126791)

Expressed library(ies): 3 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               eye (0.170503)
               

               
               lin (0.145603)
               

               
               thg (0.126791)

	4-767, gnl\|bosTau2\|chr9 (20037480-20036712)
	4-767, gnl\|Hg17\|chr6 (111930430-111931477)
	4-767, gnl\|Mm7\|chr10 (39491732-39490790)