Non-Coding RNA Search

Ss1.1-unkn-MI-P-A1-aan-e-11-1-UM.s1.3

Sequence:


               
               TTTGTCACAAAAAAAAATNTGAAATGACCAGAATNTGAATGAATTTGCTCACTCTTTAGA
ATTAATATGATGCTTCAAATGACATGGAAAACATTTTAGCTCCTTCTATGTCAATTATCC
AGGACTTATTTCCCCTTTTCCTCCTGACGGGCCATACAGTAACCATGAGCTAATTAATGT
TCATTTGGATCTTTGATTATCTTTTTAAAGCTCCAAGTCAACCACCAGCTAACATTGCCT
GGAAGCTGACAAATTCTAAATTATGTCTAAACTGGGAACATGTAAAAACCATGGAAAATG
AGTCTGAAGTATTGGGTTACAAGATTCTATACCGGCAAAACAGACAGAGTCAAACTCATA
TTTTGGAAACAAACAACACATCTGCTGAGCTTCTGGTTCCATTTGAAGAGGACTACTTGA
TTGAAATAAGAACAGTTAGTGATGGTGGGGATGGAAGCAGCAGTGAGGAAATTAGGATTC
CAAAAATGTCAAGTTTGAGTTCCAGAGGAGTTACAGTCTTAGAACCTGGTGTCTATTTCC
TGCCAGTTGCCATTATGATTTTTTTTACTGTTTTGCTATTCAGTCACTTATATGATGAAT
AAAACCATAAATCTTTTGAAAAAAAAAAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTTGTCACAAAAAAAAATNTGAAATGACCAGAATNTGAATGAATTTGCTCACTCTTTAGA
ATTAATATGATGCTTCAAATGACATGGAAAACATTTTAGCTCCTTCTATGTCAATTATCC
AGGACTTATTTCCCCTTTTCCTCCTGACGGGCCATACAGTAACCATGAGCTAATTAATGT
TCATTTGGATCTTTGATTATCTTTTTAAAGCTCCAAGTCAACCACCAGCTAACATTGCCT
GGAAGCTGACAAATTCTAAATTATGTCTAAACTGGGAACATGTAAAAACCATGGAAAATG
AGTCTGAAGTATTGGGTTACAAGATTCTATACCGGCAAAACAGACAGAGTCAAACTCATA
TTTTGGAAACAAACAACACATCTGCTGAGCTTCTGGTTCCATTTGAAGAGGACTACTTGA
TTGAAATAAGAACAGTTAGTGATGGTGGGGATGGAAGCAGCAGTGAGGAAATTAGGATTC
CAAAAATGTCAAGTTTGAGTTCCAGAGGAGTTACAGTCTTAGAACCTGGTGTCTATTTCC
TGCCAGTTGCCATTATGATTTTTTTTACTGTTTTGCTATTCAGTCACTTATATGATGAAT
AAAACCATAAATCTTTTGAAAAAAAAAAAAAAAAAA

Coded protein: 1 entry(ies)

More info

Coded protein: 1 entry(ies)

Help | Less info


               
               gi|61881351|ref|XP_593025.1|

Coded protein: 1 entry(ies)

Help | Less info

Protein identifier


               
               gi|61881351|ref|XP_593025.1|

Aligned organism(s): 6 entry(ies)

More info

Aligned organism(s): 6 entry(ies)

Help | Less info


               
               1-323, gnl|bosTau2|chr22 (19834010-19833687)
               

               
               1-323, gnl|Hg17|chr3 (1417910-1418229)
               

               
               1-323, gnl|Mm7|chr6 (104955134-104955446)
               


               
               490-616, gnl|bosTau2|chr22 (19831886-19831763)
               

               
               490-616, gnl|Hg17|chr3 (1419999-1420123)
               

               
               490-616, gnl|Mm7|chr6 (104959079-104959200)

Aligned organism(s): 6 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-323, gnl|bosTau2|chr22 (19834010-19833687)
               

               
               1-323, gnl|Hg17|chr3 (1417910-1418229)
               

               
               1-323, gnl|Mm7|chr6 (104955134-104955446)
               


               
               490-616, gnl|bosTau2|chr22 (19831886-19831763)
               

               
               490-616, gnl|Hg17|chr3 (1419999-1420123)
               

               
               490-616, gnl|Mm7|chr6 (104959079-104959200)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

Help | Less info


               
               fco (0.157208)

Expressed library(ies): 1 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               fco (0.157208)

	1-323, gnl\|bosTau2\|chr22 (19834010-19833687)
	1-323, gnl\|Hg17\|chr3 (1417910-1418229)
	1-323, gnl\|Mm7\|chr6 (104955134-104955446)

	490-616, gnl\|bosTau2\|chr22 (19831886-19831763)
	490-616, gnl\|Hg17\|chr3 (1419999-1420123)
	490-616, gnl\|Mm7\|chr6 (104959079-104959200)