Non-Coding RNA Search

Ss1.1-unkn-MI-P-A1-aan-h-09-1-UM.s1.3

Sequence:


               
               GCTGATATGTACGGGGGTGATGATAGTGACCGAGATTAAGAGTATGGTATGACTTCACAG
ATGTCAATGGAAGTACTCTCTTTGTTACTAGATGGAGTGGCCTGCTTTCTCTTCCTTGGA
GGAAATTTTTAAAAAAATCAAAATTACAAACAATACGTAGGTGTTGTCTTAGTAAGAGTT
TGCTTAATCAGTAAGTTTCTGTGAATGAATATGAATGACATAGATTTTAATAAGTATTAA
TAACCAGTTCACCCTCTTTGCCTCACAAACTCTGAAGGAAAGTATATCACATCTATAATC
AATAAAAACATACAAAAGGCTTTTTGTGCCTTTTCTTAGCTATAAGAACTTTATAAATAA
TGTTTTATTAACTGACTTACAGTCACCTTTAATATTAAATGAAACATTGTGCAACTGCTT
TGTAAATTAATATGAAAAAAAATCCCTAAAGAAATAGGAATGATTATTACTGCCATATTT
ATTTAGTTGAATAATGTCTTTGTGTTAATTCATTCATATTTTTATAAATGTATATTTATA
TTTTTATATTTTTATGAAATAAAATAGTATTTATAAAAATAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GCTGATATGTACGGGGGTGATGATAGTGACCGAGATTAAGAGTATGGTATGACTTCACAG
ATGTCAATGGAAGTACTCTCTTTGTTACTAGATGGAGTGGCCTGCTTTCTCTTCCTTGGA
GGAAATTTTTAAAAAAATCAAAATTACAAACAATACGTAGGTGTTGTCTTAGTAAGAGTT
TGCTTAATCAGTAAGTTTCTGTGAATGAATATGAATGACATAGATTTTAATAAGTATTAA
TAACCAGTTCACCCTCTTTGCCTCACAAACTCTGAAGGAAAGTATATCACATCTATAATC
AATAAAAACATACAAAAGGCTTTTTGTGCCTTTTCTTAGCTATAAGAACTTTATAAATAA
TGTTTTATTAACTGACTTACAGTCACCTTTAATATTAAATGAAACATTGTGCAACTGCTT
TGTAAATTAATATGAAAAAAAATCCCTAAAGAAATAGGAATGATTATTACTGCCATATTT
ATTTAGTTGAATAATGTCTTTGTGTTAATTCATTCATATTTTTATAAATGTATATTTATA
TTTTTATATTTTTATGAAATAAAATAGTATTTATAAAAATAAAAAAAA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-583, gnl|bosTau2|chr1 (59917779-59917197)
               

               
               1-583, gnl|Hg17|chr5 (26917040-26916463)
               

               
               1-583, gnl|Mm7|chr15 (16915454-16916028)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-583, gnl|bosTau2|chr1 (59917779-59917197)
               

               
               1-583, gnl|Hg17|chr5 (26917040-26916463)
               

               
               1-583, gnl|Mm7|chr15 (16915454-16916028)

Expressed library(ies): 3 entry(ies)

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Expressed library(ies): 3 entry(ies)

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               fco (0.157208)
               

               
               ret (0.128733)
               

               
               ecc (0.115035)

Expressed library(ies): 3 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               fco (0.157208)
               

               
               ret (0.128733)
               

               
               ecc (0.115035)

	1-583, gnl\|bosTau2\|chr1 (59917779-59917197)
	1-583, gnl\|Hg17\|chr5 (26917040-26916463)
	1-583, gnl\|Mm7\|chr15 (16915454-16916028)