Non-Coding RNA Search

Ss1.1-unkn-MI-P-AY0-nes-b-09-0-UI.s1.3

Sequence:


               
               CGGCCGCGTGGTGCGGCTGCACCCGGTCATCTTGGCCTCCATCGTGGACAGCTACGAGCG
ACGCAACGAGGGCGCCGCCCGGGTCATCGGGACCCTGCTGGGTGAGGGCCCGCCGCGGGC
TGGCCTTGGCCTCCCGCCGCCGTCTCGCGCCCCTCTCTTCCCGTCCCCGTGGCGGTTACC
TGTTGAATAGACGCCGTGTGCCACGCGGTCTAGGTTTATCCTCGGTCGCCCGGTGGATGG
GTCTCAATCTGCGGAAGATGAGGTCCACGCTGGCGAGGACGCGGAAACGCTCGCCTCCCC
CGCCCGGTGACCTCGTTTCCCCCCTTATCTGCTGCTGCGCGTCTTGACTTTCCAGGTGTT
TACTAAGAAGTTTCTACCCAGTTGGCAAGGGAGTCGAGGACGTCTGTAAAAAGGCACCAC
CCTCGACAAGTAGCTGGTTAGGCAGGAACTCATGTAGGGTTTCAGTAACACTCCGGTTTC
CTGAGCCTCTAAGCGGGATCCTCTGAGCCCCGGTGTCCCCGATGTCAGTGCCCCCAGTGC
CGGCTCTGATTCTCCGTTGGAACACAAACAGTAATTACCTATTACTGTAGTAACATTCAG
ACGGAGAAACAGGTTTTTCCCTGCTCCCATCCCAAAGGTGGGGAATAGGTATTTTATGTT
AAAGTGGTTCATGAAACGGAGACGCCTTGAAGCGGGGTGCTCTGACGAGATGTCCTTTTC
TCGGGGGGCTGCTGGGCCCGTCAAATTCATTTTCACTCCGCCCCGCTC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CGGCCGCGTGGTGCGGCTGCACCCGGTCATCTTGGCCTCCATCGTGGACAGCTACGAGCG
ACGCAACGAGGGCGCCGCCCGGGTCATCGGGACCCTGCTGGGTGAGGGCCCGCCGCGGGC
TGGCCTTGGCCTCCCGCCGCCGTCTCGCGCCCCTCTCTTCCCGTCCCCGTGGCGGTTACC
TGTTGAATAGACGCCGTGTGCCACGCGGTCTAGGTTTATCCTCGGTCGCCCGGTGGATGG
GTCTCAATCTGCGGAAGATGAGGTCCACGCTGGCGAGGACGCGGAAACGCTCGCCTCCCC
CGCCCGGTGACCTCGTTTCCCCCCTTATCTGCTGCTGCGCGTCTTGACTTTCCAGGTGTT
TACTAAGAAGTTTCTACCCAGTTGGCAAGGGAGTCGAGGACGTCTGTAAAAAGGCACCAC
CCTCGACAAGTAGCTGGTTAGGCAGGAACTCATGTAGGGTTTCAGTAACACTCCGGTTTC
CTGAGCCTCTAAGCGGGATCCTCTGAGCCCCGGTGTCCCCGATGTCAGTGCCCCCAGTGC
CGGCTCTGATTCTCCGTTGGAACACAAACAGTAATTACCTATTACTGTAGTAACATTCAG
ACGGAGAAACAGGTTTTTCCCTGCTCCCATCCCAAAGGTGGGGAATAGGTATTTTATGTT
AAAGTGGTTCATGAAACGGAGACGCCTTGAAGCGGGGTGCTCTGACGAGATGTCCTTTTC
TCGGGGGGCTGCTGGGCCCGTCAAATTCATTTTCACTCCGCCCCGCTC

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

Help | Less info


               
               1-102, gnl|bosTau2|chr13 (33285604-33285705)
               

               
               1-102, gnl|Hg17|chr2 (58390501-58390602)
               

               
               1-102, gnl|Mm7|chr7 (104849663-104852702)

Aligned organism(s): 3 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-102, gnl|bosTau2|chr13 (33285604-33285705)
               

               
               1-102, gnl|Hg17|chr2 (58390501-58390602)
               

               
               1-102, gnl|Mm7|chr7 (104849663-104852702)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

Help | Less info


               
               pla (0.133672)

Expressed library(ies): 1 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               pla (0.133672)

	1-102, gnl\|bosTau2\|chr13 (33285604-33285705)
	1-102, gnl\|Hg17\|chr2 (58390501-58390602)
	1-102, gnl\|Mm7\|chr7 (104849663-104852702)