Non-Coding RNA Search

Ss1.1-unkn-MI-P-H5-aee-e-03-1-UM.s1.ab1.3

Sequence:


               
               CAATCAGCCCCCGATGGACATGAGTATATTTATGTGGACCCGATGCAGCTGCCTTATGAC
TCGAGGTGNGAGTTTCCAAGAGATGGACTAGTGCTTGGTCGGATCCTGGGGTCTGGTGCG
TTTGGGAAAGTGGTTGAAGGAACTGCCTATGGATTAAGCCGGTCCCAACCTGTCATGAAA
GTAGCTGTGAAGATGCTAAAACCCACAGCCAGATCCAGTGAAAAACAAGCTCTCATGTCT
GAACTGAAGATAATGACCCATCTGGGGCCACATTTAAACATTGTGAACCTGCTGGGAGCC
TGTACCAAGTCAGGCCCCATTTACATCATCACTGAGTACTGCTTCTATGGGGATTTGGTC
AACTATTTGCACAAGAATAGAGACAGCTTCCTGAGCCGCCACCCAGAGAAGCCAAAGAAG
GAGCTGGACATTTTTGGACTGAACCCCGCTGATGAGAGCACACGGAGTTATGTTATTTTA
TCTTTTGAAAACAATGGTGACTACATGGACATGAAGCAAGCTGACACCACCCAGTATGTC
CCCATGTTGGAAAGGAAAGAAGTTTCTAAATACTCAGACATCCAGAGATCACTGTATGAT
CGCCCAGCCTCATATAAGAAGAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CAATCAGCCCCCGATGGACATGAGTATATTTATGTGGACCCGATGCAGCTGCCTTATGAC
TCGAGGTGNGAGTTTCCAAGAGATGGACTAGTGCTTGGTCGGATCCTGGGGTCTGGTGCG
TTTGGGAAAGTGGTTGAAGGAACTGCCTATGGATTAAGCCGGTCCCAACCTGTCATGAAA
GTAGCTGTGAAGATGCTAAAACCCACAGCCAGATCCAGTGAAAAACAAGCTCTCATGTCT
GAACTGAAGATAATGACCCATCTGGGGCCACATTTAAACATTGTGAACCTGCTGGGAGCC
TGTACCAAGTCAGGCCCCATTTACATCATCACTGAGTACTGCTTCTATGGGGATTTGGTC
AACTATTTGCACAAGAATAGAGACAGCTTCCTGAGCCGCCACCCAGAGAAGCCAAAGAAG
GAGCTGGACATTTTTGGACTGAACCCCGCTGATGAGAGCACACGGAGTTATGTTATTTTA
TCTTTTGAAAACAATGGTGACTACATGGACATGAAGCAAGCTGACACCACCCAGTATGTC
CCCATGTTGGAAAGGAAAGAAGTTTCTAAATACTCAGACATCCAGAGATCACTGTATGAT
CGCCCAGCCTCATATAAGAAGAAA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               311-473, gnl|bosTau2|chr6 (34559061-34558899)
               

               
               311-473, gnl|Hg17|chr4 (54985454-54985616)
               

               
               311-473, gnl|Mm7|chr5 (74599772-74599934)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               311-473, gnl|bosTau2|chr6 (34559061-34558899)
               

               
               311-473, gnl|Hg17|chr4 (54985454-54985616)
               

               
               311-473, gnl|Mm7|chr5 (74599772-74599934)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               elu (0.385356)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               elu (0.385356)

	311-473, gnl\|bosTau2\|chr6 (34559061-34558899)
	311-473, gnl\|Hg17\|chr4 (54985454-54985616)
	311-473, gnl\|Mm7\|chr5 (74599772-74599934)