Non-Coding RNA Search

Ss1.1-unkn-MI-P-NA-aea-d-04-1-UM.s1.ab1.3

Sequence:


               
               AGGATGCAATATAGACAATATTATTTTGCAATTCTAGCCTCATTGAATTTATCTTATTAC
CATGCTAGTTTAGAGATATTTTGAACTATATAACATAAAAAATCTGGTCCAACCCTAAGT
TTTTTTATTACACCAAAATTATAAAAATGTGAAAATATTTTACTACCCTTTGACTTACTT
TAAATCTTTTTTTGGTTATGAAACTAATATTATTACAATATGACATTAACACATAGCTCA
AAATATTAAAAACGCTATTTTTTCCATTATTCTGGTTTAAACAGAATGTTTTTCCAAAGT
TCAGTAAGTTACAATGCTCAAAAATCCTACATGGTTTTCTAATGTTAATTTGTATTTCCT
TTGTTCCATGACATTTCATGAATGTTGCCCAATCAAATTCGGTTTATTTAGTTCAAGATG
CTGCAGTGGAAACTAGTTCACTGACTGGGGCATACCAAAGATCTGGCCTCTAGTGCTGGC
TCCAGGTAGCTCTGTGACTTTGGGAAGATATTTGATTATCTCTGGGCTTCATTTCCTTCA
TATTATAAAATGCAGGGGGGCTGGACAGCTGATCTCTGAGGTTCCTTCAGGCTCCACTTT
CTATGACTTGCAGTTTGGTTGCAGTCAAGTCAGCAGAGGGAGCACTTTTTCTACATCTCA
TAAATTCTGACTATTAATACAACGCCTTTCAAAATCAANGAGTTTGTGAAGAACAGAATT
GANACTAAATATTGGCAATCTTTCACACAATTGTTATCAAATTCCAACTATGGATATAGA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AGGATGCAATATAGACAATATTATTTTGCAATTCTAGCCTCATTGAATTTATCTTATTAC
CATGCTAGTTTAGAGATATTTTGAACTATATAACATAAAAAATCTGGTCCAACCCTAAGT
TTTTTTATTACACCAAAATTATAAAAATGTGAAAATATTTTACTACCCTTTGACTTACTT
TAAATCTTTTTTTGGTTATGAAACTAATATTATTACAATATGACATTAACACATAGCTCA
AAATATTAAAAACGCTATTTTTTCCATTATTCTGGTTTAAACAGAATGTTTTTCCAAAGT
TCAGTAAGTTACAATGCTCAAAAATCCTACATGGTTTTCTAATGTTAATTTGTATTTCCT
TTGTTCCATGACATTTCATGAATGTTGCCCAATCAAATTCGGTTTATTTAGTTCAAGATG
CTGCAGTGGAAACTAGTTCACTGACTGGGGCATACCAAAGATCTGGCCTCTAGTGCTGGC
TCCAGGTAGCTCTGTGACTTTGGGAAGATATTTGATTATCTCTGGGCTTCATTTCCTTCA
TATTATAAAATGCAGGGGGGCTGGACAGCTGATCTCTGAGGTTCCTTCAGGCTCCACTTT
CTATGACTTGCAGTTTGGTTGCAGTCAAGTCAGCAGAGGGAGCACTTTTTCTACATCTCA
TAAATTCTGACTATTAATACAACGCCTTTCAAAATCAANGAGTTTGTGAAGAACAGAATT
GANACTAAATATTGGCAATCTTTCACACAATTGTTATCAAATTCCAACTATGGATATAGA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               3-778, gnl|bosTau2|chr5 (51218642-51217881)
               

               
               3-778, gnl|Hg17|chr12 (26163178-26163966)
               

               
               3-778, gnl|Mm7|chr6 (145950429-145951218)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               3-778, gnl|bosTau2|chr5 (51218642-51217881)
               

               
               3-778, gnl|Hg17|chr12 (26163178-26163966)
               

               
               3-778, gnl|Mm7|chr6 (145950429-145951218)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               spc (0.113366)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               spc (0.113366)

	3-778, gnl\|bosTau2\|chr5 (51218642-51217881)
	3-778, gnl\|Hg17\|chr12 (26163178-26163966)
	3-778, gnl\|Mm7\|chr6 (145950429-145951218)