Non-Coding RNA Search

Ss1.1-unkn-MI-P-NA-aeg-h-08-1-UM.s1.ab1.3

Sequence:


               
               TTTTTTTTTTTTTTTTGTAGTACCATGGCTCTGACAGTTCAGAATCCAATGACTCTCAGA
CTTACCTCCTCAAGTTAAGTTCTCAGGTATGATTGAAAATTTCTGCCTATGATATGGATA
CACTAAATAGGAACTCTTCTTACTGTGACTAACAGTCAAGCAAAAAGAAGTCTAAAGTTG
TCTAATTATTGTATCACACAATTATTTCTTCCTTATTATATACCACATCCTTAAATCATA
GAATTTTCTAACCTTAGGGTTTCTCAACACCCCTGCTTCACTGATGAGACCCGTTGATCC
ACTGAGATTAAATTACTTCTGAAAAGCCACACCACTTGTTAATGAGATAACATATATCAT
TTGACTGCTAGTCTAATATTCATTTATTTATTTAACTATATACTGAGTTCTGACTGTGTG
CTTGGGAATATAGCAGTGAACAAAGCAAGACAAAAATCCTTGCCTTTTGTGGTTTATATT
CTCATTGTTAGGTTGTTTGCTTTCTTTGATGTTGACTTCTATGAGCTGTTTGTGGATGTT
GGATATTAACCCATTATCAGTGGTATCGTTTGCAAATATTTTCTCCCATCCAGTAGGTTG
CTTTTCATTCTGGTTGATGGTTTCTTGACTGTGCAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTTTTTTTTTTTTTTTGTAGTACCATGGCTCTGACAGTTCAGAATCCAATGACTCTCAGA
CTTACCTCCTCAAGTTAAGTTCTCAGGTATGATTGAAAATTTCTGCCTATGATATGGATA
CACTAAATAGGAACTCTTCTTACTGTGACTAACAGTCAAGCAAAAAGAAGTCTAAAGTTG
TCTAATTATTGTATCACACAATTATTTCTTCCTTATTATATACCACATCCTTAAATCATA
GAATTTTCTAACCTTAGGGTTTCTCAACACCCCTGCTTCACTGATGAGACCCGTTGATCC
ACTGAGATTAAATTACTTCTGAAAAGCCACACCACTTGTTAATGAGATAACATATATCAT
TTGACTGCTAGTCTAATATTCATTTATTTATTTAACTATATACTGAGTTCTGACTGTGTG
CTTGGGAATATAGCAGTGAACAAAGCAAGACAAAAATCCTTGCCTTTTGTGGTTTATATT
CTCATTGTTAGGTTGTTTGCTTTCTTTGATGTTGACTTCTATGAGCTGTTTGTGGATGTT
GGATATTAACCCATTATCAGTGGTATCGTTTGCAAATATTTTCTCCCATCCAGTAGGTTG
CTTTTCATTCTGGTTGATGGTTTCTTGACTGTGCAA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               4-493, gnl|bosTau2|chr4 (54145287-54145803)
               

               
               4-493, gnl|Hg17|chr7 (134201158-134201693)
               

               
               4-493, gnl|Mm7|chr6 (34754197-34754709)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               4-493, gnl|bosTau2|chr4 (54145287-54145803)
               

               
               4-493, gnl|Hg17|chr7 (134201158-134201693)
               

               
               4-493, gnl|Mm7|chr6 (34754197-34754709)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               sag (0.182715)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               sag (0.182715)

	4-493, gnl\|bosTau2\|chr4 (54145287-54145803)
	4-493, gnl\|Hg17\|chr7 (134201158-134201693)
	4-493, gnl\|Mm7\|chr6 (34754197-34754709)