Non-Coding RNA Search

Ss1.1-unkn-MI-P-NA-aet-h-12-1-UM.s1.3

Sequence:


               
               GAGGATGGTCCGTGGACCCCACGTGCCCATCACCCGGCTACATCAATTTTATCAATTATG
ATTACCTGGTTTCATCTGTATTTCCCTCTCCCCGCCTATATTGTTTATTGAAAGTCCAAG
ACACTGTGCCAGTTCAACCAGGACTGCTTTGGGATATTGGGACACTCTTTTGGTGGTGAC
AGTGGTGGGGTGCACTGCCATTATCATATCAGGTCTGCTTTTTGCTTTTCATGTTAAACT
AATGAAGTTCCAGAGATGAGCCTTAGAAACGAAAGTCTTCAGAATTAACATGAAGTCTCA
AAAAGTGATGACAGGGATGCTGCCTTTTCCTGCAGCCACAAAAGGAGAGACTGTTGTGTT
GTAAACTCTTTCAGAGACCTCGCGGTCTTTGATCAGGTGCTCACCCGAGGCACCAGAGTA
TCAGTCTTTTTTCCTGTGTAAGACGAGGCTTGTGTGACTATTAGAATTGTTATCAGCTTG
TCCTGGTATCATAAAGTAACTCTGGGCTTGGAACTATAATTTGGAAATTGTTGTTGTGTT
CTGTAAAAATAAGCTCCCCAAAGTAATCAGTAACTGGTTGTCTGTCTTGGTAATTTGACA
CCCTGGTAATAATGCAATTATTTCTTTGTTCTGAAACAGTATAAATAGTTGTAAGCCTGC
ATGCGTGATGGAAAAATAAAAGCCTGTATCTCTGTTAAAAAAAAAAAAAAAAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GAGGATGGTCCGTGGACCCCACGTGCCCATCACCCGGCTACATCAATTTTATCAATTATG
ATTACCTGGTTTCATCTGTATTTCCCTCTCCCCGCCTATATTGTTTATTGAAAGTCCAAG
ACACTGTGCCAGTTCAACCAGGACTGCTTTGGGATATTGGGACACTCTTTTGGTGGTGAC
AGTGGTGGGGTGCACTGCCATTATCATATCAGGTCTGCTTTTTGCTTTTCATGTTAAACT
AATGAAGTTCCAGAGATGAGCCTTAGAAACGAAAGTCTTCAGAATTAACATGAAGTCTCA
AAAAGTGATGACAGGGATGCTGCCTTTTCCTGCAGCCACAAAAGGAGAGACTGTTGTGTT
GTAAACTCTTTCAGAGACCTCGCGGTCTTTGATCAGGTGCTCACCCGAGGCACCAGAGTA
TCAGTCTTTTTTCCTGTGTAAGACGAGGCTTGTGTGACTATTAGAATTGTTATCAGCTTG
TCCTGGTATCATAAAGTAACTCTGGGCTTGGAACTATAATTTGGAAATTGTTGTTGTGTT
CTGTAAAAATAAGCTCCCCAAAGTAATCAGTAACTGGTTGTCTGTCTTGGTAATTTGACA
CCCTGGTAATAATGCAATTATTTCTTTGTTCTGAAACAGTATAAATAGTTGTAAGCCTGC
ATGCGTGATGGAAAAATAAAAGCCTGTATCTCTGTTAAAAAAAAAAAAAAAAAAAAAAAA

Aligned organism(s): 2 entry(ies)

More info

Aligned organism(s): 2 entry(ies)

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               15-713, gnl|bosTau2|chr12 (11658407-11659111)
               

               
               15-713, gnl|Hg17|chr8 (98355581-98354896)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               15-713, gnl|bosTau2|chr12 (11658407-11659111)
               

               
               15-713, gnl|Hg17|chr8 (98355581-98354896)

Expressed library(ies): 7 entry(ies)

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Expressed library(ies): 7 entry(ies)

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               amn (0.417711)
               

               
               fhi (0.169578)
               

               
               fco (0.157208)
               

               
               spl (0.143184)
               

               
               sug (0.127291)
               

               
               eep (0.122564)
               

               
               ecc (0.115035)

Expressed library(ies): 7 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               amn (0.417711)
               

               
               fhi (0.169578)
               

               
               fco (0.157208)
               

               
               spl (0.143184)
               

               
               sug (0.127291)
               

               
               eep (0.122564)
               

               
               ecc (0.115035)

	15-713, gnl\|bosTau2\|chr12 (11658407-11659111)
	15-713, gnl\|Hg17\|chr8 (98355581-98354896)

	amn (0.417711)
	fhi (0.169578)
	fco (0.157208)
	spl (0.143184)
	sug (0.127291)
	eep (0.122564)
	ecc (0.115035)