Non-Coding RNA Search

Ss1.1-unkn-MI-P-NA-afr-a-10-1-UM.s1.3

Sequence:


               
               ATGGAGATTCCTCAGGAAAACTAAAAATAGAATTACCATTTGATCCAGCAGTCCCACTCC
TGGGCATCTATCCAGAGAAAGCCATGGCTTAAATAGACACATGTACTCCAGTGTTCATTG
CAGCACTGTATACAACAGCCAAGAGAGGGAAATAATCTAAATGCCCATCGACAGAGGAGT
GGATCAAGAAGAAGTGGTACATATATACACAATGGAATATTACTCAGCCATTAAAAGGAA
AGAAATAACGGCATTTGCAGCAACATGGATGGACCCAGAAATTATCATGCTAAATGAAGT
CAGACAGTGGGACACCAACATCAAATGCTATGACTTACATGTGTGATCTAAAAAAAGGAC
ACAATGAGCTTCTCTGCAGAACAGATACTGACTCACAGACTTTGAAGAACCTGTGGTTTC
CTGATGAGACAGGTTGGGGACTGGGGGGATGCACTGAGGGTTTGGGATGGAAATGTGATA
AAATTGGGTTGTGATGATCGTTGTACACCTATAAATGTAATAAAATTCATTGAGTAATAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ATGGAGATTCCTCAGGAAAACTAAAAATAGAATTACCATTTGATCCAGCAGTCCCACTCC
TGGGCATCTATCCAGAGAAAGCCATGGCTTAAATAGACACATGTACTCCAGTGTTCATTG
CAGCACTGTATACAACAGCCAAGAGAGGGAAATAATCTAAATGCCCATCGACAGAGGAGT
GGATCAAGAAGAAGTGGTACATATATACACAATGGAATATTACTCAGCCATTAAAAGGAA
AGAAATAACGGCATTTGCAGCAACATGGATGGACCCAGAAATTATCATGCTAAATGAAGT
CAGACAGTGGGACACCAACATCAAATGCTATGACTTACATGTGTGATCTAAAAAAAGGAC
ACAATGAGCTTCTCTGCAGAACAGATACTGACTCACAGACTTTGAAGAACCTGTGGTTTC
CTGATGAGACAGGTTGGGGACTGGGGGGATGCACTGAGGGTTTGGGATGGAAATGTGATA
AAATTGGGTTGTGATGATCGTTGTACACCTATAAATGTAATAAAATTCATTGAGTAATAA

Aligned organism(s): 2 entry(ies)

More info

Aligned organism(s): 2 entry(ies)

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               1-207, gnl|bosTau2|chr1 (22835919-22836124)
               

               
               1-207, gnl|Hg17|chr3 (100426332-100426543)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-207, gnl|bosTau2|chr1 (22835919-22836124)
               

               
               1-207, gnl|Hg17|chr3 (100426332-100426543)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               aor (0.195274)
               

               
               rec (0.17307)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               aor (0.195274)
               

               
               rec (0.17307)

	1-207, gnl\|bosTau2\|chr1 (22835919-22836124)
	1-207, gnl\|Hg17\|chr3 (100426332-100426543)