Ss1.1-unkn-MI-P-O2-abs-g-02-1-UM.s1.3
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CCTTAAGAATGAGTATGAACAAAACTACCCAGCCACCTCTATCCAGGGCAGTGAGAATGA CTGCACGGAGGAGGCCATCGGGGAACAAGGAAAGGAACAGTCACTCCTGTAGCTCTGAGG CCACCGTGCCTGGGAGGAGGTGGGGGGCGGGGAGTTAGATTTCTGCAGCTCATGCCGGGA GGGTCAGTGGTGCCAGAGGTATGACAGGCGGAAGAGGCCACCTACATTCCCCACCCTGCC CTTTGCAGGGGACCCAGAGACACCTCGCATCTTTCACGGGCTGTTTGGGCTACTTAACGT GGCACCAACTTGCCACTTGCAAGACTGCCTTCACGGAATCAGAAATCACCAAGAAGAACC ACGCGTTTCCTATGACCTTTTAAGTCCTTGGAGTCTTTTTACGATCCCCGGCAGGGGTTG GTGAGGAAGGGTATACTTTGTGGTCGGTTTGCTTTCCCATTAGAAACACAAAGGAAACCC AGCAATTTATTGCCACGTGAACAGCCTACAGAGTAGATCTGAGAGCAGCCCGTTTTGCCT GATCCCTTGTACGGGGCGTGGGACAAGGACCCAAGGGACCCTCCGCTCCCTGAAGTGTCT CCCCCCGCCCAGTGTTGGCCTTTCGGAAGCATCCCAGCGGGGCTTTCTGAGGGCCACCGG TCCTCGTGCTCTGCATTGCAGTCCTCTGTGCTTTTATCCCGGCTCTGAAGGATCGAACAC TGCTCTGTCTTCCAAAGGGGAAAAAAAGAGATTCATTTGTTTTGAGCAATAAAGTAATAC AAAATGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CCTTAAGAATGAGTATGAACAAAACTACCCAGCCACCTCTATCCAGGGCAGTGAGAATGA CTGCACGGAGGAGGCCATCGGGGAACAAGGAAAGGAACAGTCACTCCTGTAGCTCTGAGG CCACCGTGCCTGGGAGGAGGTGGGGGGCGGGGAGTTAGATTTCTGCAGCTCATGCCGGGA GGGTCAGTGGTGCCAGAGGTATGACAGGCGGAAGAGGCCACCTACATTCCCCACCCTGCC CTTTGCAGGGGACCCAGAGACACCTCGCATCTTTCACGGGCTGTTTGGGCTACTTAACGT GGCACCAACTTGCCACTTGCAAGACTGCCTTCACGGAATCAGAAATCACCAAGAAGAACC ACGCGTTTCCTATGACCTTTTAAGTCCTTGGAGTCTTTTTACGATCCCCGGCAGGGGTTG GTGAGGAAGGGTATACTTTGTGGTCGGTTTGCTTTCCCATTAGAAACACAAAGGAAACCC AGCAATTTATTGCCACGTGAACAGCCTACAGAGTAGATCTGAGAGCAGCCCGTTTTGCCT GATCCCTTGTACGGGGCGTGGGACAAGGACCCAAGGGACCCTCCGCTCCCTGAAGTGTCT CCCCCCGCCCAGTGTTGGCCTTTCGGAAGCATCCCAGCGGGGCTTTCTGAGGGCCACCGG TCCTCGTGCTCTGCATTGCAGTCCTCTGTGCTTTTATCCCGGCTCTGAAGGATCGAACAC TGCTCTGTCTTCCAAAGGGGAAAAAAAGAGATTCATTTGTTTTGAGCAATAAAGTAATAC AAAATGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA |
| Aligned organism(s): 27 entry(ies) | More info |
| Aligned organism(s): 27 entry(ies) | Help | Less info |
| 1-245, gnl|bosTau2|chr3 (22058185-22058445) | |
| 1-245, gnl|canFam2|chr17 (57451467-57452788) | |
| 1-245, gnl|dasNov1|scaffold_10102 (36468-37677) | |
| 1-245, gnl|echTel1|scaffold_312044 (116245-117510) | |
| 1-245, gnl|hg17|chr1 (117242140-117243465) | |
| 1-245, gnl|Hg17|chr1 (117242370-117242637) | |
| 1-245, gnl|loxAfr1|scaffold_8463 (2039-759) | |
| 1-245, gnl|mm7|chr3 (100837651-100836458) | |
| 1-245, gnl|monDom2|scaffold_82 (3100770-3102094) | |
| 1-245, gnl|oryCun1|scaffold_203626 (163540-162394) | |
| 1-245, gnl|panTro1|chr1 (117084160-117085498) | |
| 1-245, gnl|rheMac2|chr1 (119958718-119960032) | |
| 1-245, gnl|rn3|chr2 (196056891-196055716) | |
| 248-787, gnl|bosTau2|chr3 (22058475-22058999) | |
| 248-787, gnl|canFam2|chr17 (57451467-57452788) | |
| 248-787, gnl|dasNov1|scaffold_10102 (36468-37677) | |
| 248-787, gnl|echTel1|scaffold_312044 (116245-117510) | |
| 248-787, gnl|hg17|chr1 (117242140-117243465) | |
| 248-787, gnl|Hg17|chr1 (117242675-117243266) | |
| 248-787, gnl|loxAfr1|scaffold_8463 (2039-759) | |
| 248-787, gnl|mm7|chr3 (100837651-100836458) | |
| 248-787, gnl|Mm7|chr3 (100837192-100836639) | |
| 248-787, gnl|monDom2|scaffold_82 (3100770-3102094) | |
| 248-787, gnl|oryCun1|scaffold_203626 (163540-162394) | |
| 248-787, gnl|panTro1|chr1 (117084160-117085498) | |
| 248-787, gnl|rheMac2|chr1 (119958718-119960032) | |
| 248-787, gnl|rn3|chr2 (196056891-196055716) |
| Aligned organism(s): 27 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-245, gnl|bosTau2|chr3 (22058185-22058445) | |
| 1-245, gnl|canFam2|chr17 (57451467-57452788) | |
| 1-245, gnl|dasNov1|scaffold_10102 (36468-37677) | |
| 1-245, gnl|echTel1|scaffold_312044 (116245-117510) | |
| 1-245, gnl|hg17|chr1 (117242140-117243465) | |
| 1-245, gnl|Hg17|chr1 (117242370-117242637) | |
| 1-245, gnl|loxAfr1|scaffold_8463 (2039-759) | |
| 1-245, gnl|mm7|chr3 (100837651-100836458) | |
| 1-245, gnl|monDom2|scaffold_82 (3100770-3102094) | |
| 1-245, gnl|oryCun1|scaffold_203626 (163540-162394) | |
| 1-245, gnl|panTro1|chr1 (117084160-117085498) | |
| 1-245, gnl|rheMac2|chr1 (119958718-119960032) | |
| 1-245, gnl|rn3|chr2 (196056891-196055716) | |
| 248-787, gnl|bosTau2|chr3 (22058475-22058999) | |
| 248-787, gnl|canFam2|chr17 (57451467-57452788) | |
| 248-787, gnl|dasNov1|scaffold_10102 (36468-37677) | |
| 248-787, gnl|echTel1|scaffold_312044 (116245-117510) | |
| 248-787, gnl|hg17|chr1 (117242140-117243465) | |
| 248-787, gnl|Hg17|chr1 (117242675-117243266) | |
| 248-787, gnl|loxAfr1|scaffold_8463 (2039-759) | |
| 248-787, gnl|mm7|chr3 (100837651-100836458) | |
| 248-787, gnl|Mm7|chr3 (100837192-100836639) | |
| 248-787, gnl|monDom2|scaffold_82 (3100770-3102094) | |
| 248-787, gnl|oryCun1|scaffold_203626 (163540-162394) | |
| 248-787, gnl|panTro1|chr1 (117084160-117085498) | |
| 248-787, gnl|rheMac2|chr1 (119958718-119960032) | |
| 248-787, gnl|rn3|chr2 (196056891-196055716) |
| Expressed library(ies): 9 entry(ies) | More info |
| Expressed library(ies): 9 entry(ies) | Help | Less info |
| amn (0.417711) | |
| eye (0.170503) | |
| fhi (0.169578) | |
| cag (0.151194) | |
| nca (0.136874) | |
| ute (0.132784) | |
| cov (0.132153) | |
| eru (0.120048) | |
| nbm (0.0993246) |
| Expressed library(ies): 9 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| amn (0.417711) | |
| eye (0.170503) | |
| fhi (0.169578) | |
| cag (0.151194) | |
| nca (0.136874) | |
| ute (0.132784) | |
| cov (0.132153) | |
| eru (0.120048) | |
| nbm (0.0993246) |