Non-Coding RNA Search

Ss1.1-unkn-MI-P-O2-adv-d-09-1-UM.s1.3

Sequence:


               
               ACCAGAGACAAAAAACACAATAGCACATTCAGATCAAAGGCGTTTTAACACAGAGCGAAC
AGACAAGATAACCCCACATCCCACTTCAGATACCCTCAAGGTCAAGTGGAGCCCACCGAT
ACCTGGATGCACGGCAGTGACGTTTCCCACCTAGACTGTCCTTTCAGCTTAGCGGGTGGC
TGGCACCTTCCAAGGGCAGTTGGCACTTCCTCTGGCAAAGTCTGGCCCTCACCATCCTTC
GAGGACTTGCAAGTCTATCTATCCCCTCAACCAGGCCACAAGGTCAGAGCTGAGCTCACC
CACCAAGGGAGACACCTCCAATTCACCGAGGCGAAGGGCAGCAGTGCCTTCTGCTTTCTG
CCTTGGGGACGTGAGGACAGGCGGTAGAAACCTTCTCTCCTCTTCAGGCTTCACCCGGAG
GGTAAAGGCAGGTACCCGACAGCATTACAATGTCCAAAGACGCCGTGAGGAAATCATACC
ACTTTATCCGCTTTCCCTTCTGACTCTTCGGAACTCAGACTCCAAATTCATATCAGGTTC
CATTTCCGATAATACCCAAGTGACTATTATCTTAAAACTTAAGTTGTATGGGTCACAGCG
GTTTGAAATTTCCAGGGACCAATGCTCCTCACAACTTTAATGTGTATTAATTTAGAAACT
GGAGTTAGGAAGGGATAAGAATGTGACTGGGGGGGG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ACCAGAGACAAAAAACACAATAGCACATTCAGATCAAAGGCGTTTTAACACAGAGCGAAC
AGACAAGATAACCCCACATCCCACTTCAGATACCCTCAAGGTCAAGTGGAGCCCACCGAT
ACCTGGATGCACGGCAGTGACGTTTCCCACCTAGACTGTCCTTTCAGCTTAGCGGGTGGC
TGGCACCTTCCAAGGGCAGTTGGCACTTCCTCTGGCAAAGTCTGGCCCTCACCATCCTTC
GAGGACTTGCAAGTCTATCTATCCCCTCAACCAGGCCACAAGGTCAGAGCTGAGCTCACC
CACCAAGGGAGACACCTCCAATTCACCGAGGCGAAGGGCAGCAGTGCCTTCTGCTTTCTG
CCTTGGGGACGTGAGGACAGGCGGTAGAAACCTTCTCTCCTCTTCAGGCTTCACCCGGAG
GGTAAAGGCAGGTACCCGACAGCATTACAATGTCCAAAGACGCCGTGAGGAAATCATACC
ACTTTATCCGCTTTCCCTTCTGACTCTTCGGAACTCAGACTCCAAATTCATATCAGGTTC
CATTTCCGATAATACCCAAGTGACTATTATCTTAAAACTTAAGTTGTATGGGTCACAGCG
GTTTGAAATTTCCAGGGACCAATGCTCCTCACAACTTTAATGTGTATTAATTTAGAAACT
GGAGTTAGGAAGGGATAAGAATGTGACTGGGGGGGG

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-599, gnl|bosTau2|chr2 (71979240-71978625)
               

               
               1-599, gnl|Hg17|chr2 (233264470-233263873)
               

               
               1-599, gnl|Mm7|chr1 (87133071-87132483)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-599, gnl|bosTau2|chr2 (71979240-71978625)
               

               
               1-599, gnl|Hg17|chr2 (233264470-233263873)
               

               
               1-599, gnl|Mm7|chr1 (87133071-87132483)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               med (0.116252)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               med (0.116252)

	1-599, gnl\|bosTau2\|chr2 (71979240-71978625)
	1-599, gnl\|Hg17\|chr2 (233264470-233263873)
	1-599, gnl\|Mm7\|chr1 (87133071-87132483)