Non-Coding RNA Search

Ss1.1-unkn-PPL3_02H03.5

Sequence:


               
               AAAATTCTTCCCTAGGCTGGCCAGACCTTCCCTTGCTTCTAGTCATCCCGAATCCTAAGG
CTCAGTGCAGTTACTATTTGCAAGTTTCCCAAGGTTTGGCTGCATCATCGTCACTGCCCC
AAAACAAACAATCCTGCTGGAAATCATGGTTTTCCAGGTTGGGAGGAAAAAAGAAAAAAA
AAAAATCAGGGATTTTCAGAAAAGGTGCTCCTGTTTTTGTCCTCTGGTGCCACCCTCCTG
TCATCCCTCCTAATTATAAACAAAACTGGTCTTGATATTTCATATAACTTAAATCAGGTC
AAAAGAAACATCGAGAACAGCCCCTTGCTGAATAAAAATGACTTTGTTTGGGTGCACTCA
GGATGTATGTGTGTGTGCGATGCTGCGGCATTGAAATCTTCTCTAGAGGGAGAGGGGTTG
TTTTTAATACAATTTTACCACTGGAAATAAATTCTGATGGTGGCGGTGAAGAAAACCCTT
AAATTATATCACAGAAGCCATTATTTTTTACCTGTAAAGATGTGTGTTTTTTTTTTTAAG
AAAAAATCATTCTACTTGGAGGACAGTAATTAAAGCCCCAAATAATAGATACTACTTCTT
TTAGCTATTGTGAAAAAATAATAACACCACACCTGTCAAGGTTTATCGGAGCCCCCTCAT
TTCCATCAAAAAGGTTTCTATAGGTGTATTATTTACATTTTAAAACATGGGAACGCTGTC
CTTTGTGATGACAAATCCCCTCCC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AAAATTCTTCCCTAGGCTGGCCAGACCTTCCCTTGCTTCTAGTCATCCCGAATCCTAAGG
CTCAGTGCAGTTACTATTTGCAAGTTTCCCAAGGTTTGGCTGCATCATCGTCACTGCCCC
AAAACAAACAATCCTGCTGGAAATCATGGTTTTCCAGGTTGGGAGGAAAAAAGAAAAAAA
AAAAATCAGGGATTTTCAGAAAAGGTGCTCCTGTTTTTGTCCTCTGGTGCCACCCTCCTG
TCATCCCTCCTAATTATAAACAAAACTGGTCTTGATATTTCATATAACTTAAATCAGGTC
AAAAGAAACATCGAGAACAGCCCCTTGCTGAATAAAAATGACTTTGTTTGGGTGCACTCA
GGATGTATGTGTGTGTGCGATGCTGCGGCATTGAAATCTTCTCTAGAGGGAGAGGGGTTG
TTTTTAATACAATTTTACCACTGGAAATAAATTCTGATGGTGGCGGTGAAGAAAACCCTT
AAATTATATCACAGAAGCCATTATTTTTTACCTGTAAAGATGTGTGTTTTTTTTTTTAAG
AAAAAATCATTCTACTTGGAGGACAGTAATTAAAGCCCCAAATAATAGATACTACTTCTT
TTAGCTATTGTGAAAAAATAATAACACCACACCTGTCAAGGTTTATCGGAGCCCCCTCAT
TTCCATCAAAAAGGTTTCTATAGGTGTATTATTTACATTTTAAAACATGGGAACGCTGTC
CTTTGTGATGACAAATCCCCTCCC

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-727, gnl|bosTau2|chr13 (62142862-62143535)
               

               
               1-727, gnl|Hg17|chr20 (51543784-51544778)
               

               
               1-727, gnl|Mm7|chr2 (169869987-169870653)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-727, gnl|bosTau2|chr13 (62142862-62143535)
               

               
               1-727, gnl|Hg17|chr20 (51543784-51544778)
               

               
               1-727, gnl|Mm7|chr2 (169869987-169870653)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               fat (0.147427)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               fat (0.147427)

	1-727, gnl\|bosTau2\|chr13 (62142862-62143535)
	1-727, gnl\|Hg17\|chr20 (51543784-51544778)
	1-727, gnl\|Mm7\|chr2 (169869987-169870653)