Ss1.1-unkn-RN004B03LFP001A03R.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GAACCATGGACATCCCCCGGTCTGTGCAGAACTTCCGGTTCTTTGCCTCCTCCATCCTGC ATCACACGTCGGAGTGCACGCAGATGGACCACCTGGGCTGTCTGCACTACACTGTGCGGA CCCCCGTGGGTATCGCGGGTCTGATCAGTCCCTGGAATCTGCCACTTTACTTGCTCACCT GGAAGATCGCTCCCGCGATCGCTGCTGGCAACACTGTGATAGCCAAGCCCAGCGAGCTGA CTTCCGTGACTGCGTGGATGATGTGCAAACTCCTGGAGAAAGCAGGGGTTCCACCAGGCG TGGTAAATATTGTGTTTGGAACGGGGCCCAGGGCAGGCGAGGCCCTGGTGTCCCATCCAG AGGTGCCCCTCATCTCCTTCACCGGGAGCCAGCCCACGGCCGAGCGGATCACACAGCTGA GTGCTCCCCACTGCAAGAAGCTCTCGCTGGAGCTGGGGGGCAAGAATCCTGCCATCATCT TTGAGGACGCCAACCTCGAGGAGTGTGTTCCCACAACGGTCAGGTCCAGCTTTGCCAACC AGGGTGAAATATGCCTCTGCACCAGCAGGATCTTTGTCCAGAGGAGTATCTACAGTGAAT TTCTAAAGAGGTTTGTAGACGCCACCAGAATGTGGAAAGTTGGCATTC------------ TCGCCAGCATGGGAGCTCTGATCAGTAAAGCTCATTTGGAGAAAGTCAGAAGTTACATCA AGAAAGCTCGCCTGGAAGGGGCCCAAATTCTGTGCGGTGAGGGAGTGGATAAGTTGAACC TCCCTCCCAGGAATCAAGGAGGGTACTTCATGCTTCCCACGGTGATAACGGACATTAAGG ATGAGTCCTGCTGCATGAAGGAAGAGATATTTGGTCCAGTGACGTGTGTGGTCCCCTTTG ATAGTGAAGAGGAAGTGATTCAAAGAGCCAACAGTGTGAAATACGGGCTGGCTGCGACCG TGTGGTCAGGCAATGTGGGGCGTGTCCACCGGGTGGCGAAGAAGTTACAGTCAGGCTTGG TCTGGACCAACTGCTGGCTCATCAGAGAGCTGAACCTTCCTTTTGGGGGGATGAAAAGTT CTGGGGTGGGTAGAGAAGGAGCCAAGGATTCTTACGAATTCTTCACTGAAGTCAAAACCG TCACCGTTAAACATTGACCTTGGCCAGTGGAGAAGTTGTTATGGTTGATGCCTGGCTGCA GAGAATCAGTCATCTAATGCCGTGAACAGACACACTGGCACAAACTCCAGCCACCAGAGT CTAGCTTATCCTCCTCAATTAGTATTTTTACTTGCTGGTGTAGAGATGCTATATCTTTTC AGTGAGGCGTCAAAGGAGAGAAGA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GAACCATGGACATCCCCCGGTCTGTGCAGAACTTCCGGTTCTTTGCCTCCTCCATCCTGC ATCACACGTCGGAGTGCACGCAGATGGACCACCTGGGCTGTCTGCACTACACTGTGCGGA CCCCCGTGGGTATCGCGGGTCTGATCAGTCCCTGGAATCTGCCACTTTACTTGCTCACCT GGAAGATCGCTCCCGCGATCGCTGCTGGCAACACTGTGATAGCCAAGCCCAGCGAGCTGA CTTCCGTGACTGCGTGGATGATGTGCAAACTCCTGGAGAAAGCAGGGGTTCCACCAGGCG TGGTAAATATTGTGTTTGGAACGGGGCCCAGGGCAGGCGAGGCCCTGGTGTCCCATCCAG AGGTGCCCCTCATCTCCTTCACCGGGAGCCAGCCCACGGCCGAGCGGATCACACAGCTGA GTGCTCCCCACTGCAAGAAGCTCTCGCTGGAGCTGGGGGGCAAGAATCCTGCCATCATCT TTGAGGACGCCAACCTCGAGGAGTGTGTTCCCACAACGGTCAGGTCCAGCTTTGCCAACC AGGGTGAAATATGCCTCTGCACCAGCAGGATCTTTGTCCAGAGGAGTATCTACAGTGAAT TTCTAAAGAGGTTTGTAGACGCCACCAGAATGTGGAAAGTTGGCATTC------------ TCGCCAGCATGGGAGCTCTGATCAGTAAAGCTCATTTGGAGAAAGTCAGAAGTTACATCA AGAAAGCTCGCCTGGAAGGGGCCCAAATTCTGTGCGGTGAGGGAGTGGATAAGTTGAACC TCCCTCCCAGGAATCAAGGAGGGTACTTCATGCTTCCCACGGTGATAACGGACATTAAGG ATGAGTCCTGCTGCATGAAGGAAGAGATATTTGGTCCAGTGACGTGTGTGGTCCCCTTTG ATAGTGAAGAGGAAGTGATTCAAAGAGCCAACAGTGTGAAATACGGGCTGGCTGCGACCG TGTGGTCAGGCAATGTGGGGCGTGTCCACCGGGTGGCGAAGAAGTTACAGTCAGGCTTGG TCTGGACCAACTGCTGGCTCATCAGAGAGCTGAACCTTCCTTTTGGGGGGATGAAAAGTT CTGGGGTGGGTAGAGAAGGAGCCAAGGATTCTTACGAATTCTTCACTGAAGTCAAAACCG TCACCGTTAAACATTGACCTTGGCCAGTGGAGAAGTTGTTATGGTTGATGCCTGGCTGCA GAGAATCAGTCATCTAATGCCGTGAACAGACACACTGGCACAAACTCCAGCCACCAGAGT CTAGCTTATCCTCCTCAATTAGTATTTTTACTTGCTGGTGTAGAGATGCTATATCTTTTC AGTGAGGCGTCAAAGGAGAGAAGA |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 22 entry(ies) | More info |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
| 1-135, gnl|bosTau2|chr9 (43343561-43343695) | |
| 1-135, gnl|canFam2|chr1 (30728333-30728469) | |
| 1-135, gnl|danRer3|chr23 (47429955-47429823) | |
| 1-135, gnl|dasNov1|scaffold_60116 (7764-7632) | |
| 1-135, gnl|echTel1|scaffold_315444 (93630-93497) | |
| 1-135, gnl|fr1|chrUn (159162434-159162302) | |
| 1-135, gnl|galGal2|chr3 (54746200-54746075) | |
| 1-135, gnl|hg17|chr6 (135305228-135305364) | |
| 1-135, gnl|Hg17|chr6 (135305374-135305240) | |
| 1-135, gnl|loxAfr1|scaffold_3206 (58627-58491) | |
| 1-135, gnl|mm7|chr10 (21108516-21108380) | |
| 1-135, gnl|Mm7|chr10 (21108368-21108502) | |
| 1-135, gnl|monDom2|scaffold_0 (75856652-75856516) | |
| 1-135, gnl|oryCun1|scaffold_200090 (77509-77640) | |
| 1-135, gnl|panTro1|chr5 (138082734-138082869) | |
| 1-135, gnl|rheMac2|chr4 (128908546-128908410) | |
| 1-135, gnl|rn3|chr1 (16755668-16755532) | |
| 1-135, gnl|tetNig1|chr14 (5832331-5832463) | |
| 1-135, gnl|xenTro1|scaffold_422 (1033636-1033509) | |
| 283-543, gnl|bosTau2|chr9 (43350366-43350626) | |
| 283-543, gnl|Hg17|chr6 (135295866-135295606) | |
| 283-543, gnl|Mm7|chr10 (21115120-21115380) |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-135, gnl|bosTau2|chr9 (43343561-43343695) | |
| 1-135, gnl|canFam2|chr1 (30728333-30728469) | |
| 1-135, gnl|danRer3|chr23 (47429955-47429823) | |
| 1-135, gnl|dasNov1|scaffold_60116 (7764-7632) | |
| 1-135, gnl|echTel1|scaffold_315444 (93630-93497) | |
| 1-135, gnl|fr1|chrUn (159162434-159162302) | |
| 1-135, gnl|galGal2|chr3 (54746200-54746075) | |
| 1-135, gnl|hg17|chr6 (135305228-135305364) | |
| 1-135, gnl|Hg17|chr6 (135305374-135305240) | |
| 1-135, gnl|loxAfr1|scaffold_3206 (58627-58491) | |
| 1-135, gnl|mm7|chr10 (21108516-21108380) | |
| 1-135, gnl|Mm7|chr10 (21108368-21108502) | |
| 1-135, gnl|monDom2|scaffold_0 (75856652-75856516) | |
| 1-135, gnl|oryCun1|scaffold_200090 (77509-77640) | |
| 1-135, gnl|panTro1|chr5 (138082734-138082869) | |
| 1-135, gnl|rheMac2|chr4 (128908546-128908410) | |
| 1-135, gnl|rn3|chr1 (16755668-16755532) | |
| 1-135, gnl|tetNig1|chr14 (5832331-5832463) | |
| 1-135, gnl|xenTro1|scaffold_422 (1033636-1033509) | |
| 283-543, gnl|bosTau2|chr9 (43350366-43350626) | |
| 283-543, gnl|Hg17|chr6 (135295866-135295606) | |
| 283-543, gnl|Mm7|chr10 (21115120-21115380) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| lun (0.300978) |