Ss1.1-unkn-R_1_F07.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GAAGTATTCACTATTTCCGCATGCCCCGCTTCTACTGGAAGGACCGGCTGCTGAAGATGA AGATGGCCGGGCTGAATGCCATTGAGACGTACGTGGCCTGGAACTTCCACGAGCCCTGGC GGCCGAGGTACCAATTCACGGGGGACCATGATGTGGAGTATTTTATTAGACTGGCCCATC AGCTGGGACTGCTGGTGATCCTGAGGCCTGGACCCTACATCTGTGCGGAGTGGGACATGG GAGGATTACCTGCTTGGCTACTGGAGAAGGAATCTATCGTTCTCCGTTCTTCCCATCCAG ACTACCTTGCAGCTGTGGACAAGTGGTTGGGTGTCCTTCTGCCCAAGATGAAGCCTCTCC TCTATCAGAATGGAGGGCCGATTATTACAGTGCAGGTTGAAAATGAATATGGCAGCTACT ATAGCTGTGATTACAACTACCTGCGTTTCCTGCAGAAGCGTTTCCACTACTACTTGGGTG AGGACGTGGTCCTGTTCACCACTGACGGGGCGCATGAGAAGTTCCTGGCGTGTGGGACGC TGGAGGGCCTCTATGCCACAGTGGACTTCGGAGTAGATGCCAACATCACAGCTGCTTTTC TAATGCAGAGGAAGTATGAACCCAGAGGACCCTTGATCAATTCTGAATTCTACACTGGCT GGTTAGACCATTGGGGCCAACCTCACTCGACAGTCAAGACTCAAGTGGTGGCTTCTTTCC TCCACGACATACTTGCCCTTGGTGCAAATGTGAACATGTACCTGCCCG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GAAGTATTCACTATTTCCGCATGCCCCGCTTCTACTGGAAGGACCGGCTGCTGAAGATGA AGATGGCCGGGCTGAATGCCATTGAGACGTACGTGGCCTGGAACTTCCACGAGCCCTGGC GGCCGAGGTACCAATTCACGGGGGACCATGATGTGGAGTATTTTATTAGACTGGCCCATC AGCTGGGACTGCTGGTGATCCTGAGGCCTGGACCCTACATCTGTGCGGAGTGGGACATGG GAGGATTACCTGCTTGGCTACTGGAGAAGGAATCTATCGTTCTCCGTTCTTCCCATCCAG ACTACCTTGCAGCTGTGGACAAGTGGTTGGGTGTCCTTCTGCCCAAGATGAAGCCTCTCC TCTATCAGAATGGAGGGCCGATTATTACAGTGCAGGTTGAAAATGAATATGGCAGCTACT ATAGCTGTGATTACAACTACCTGCGTTTCCTGCAGAAGCGTTTCCACTACTACTTGGGTG AGGACGTGGTCCTGTTCACCACTGACGGGGCGCATGAGAAGTTCCTGGCGTGTGGGACGC TGGAGGGCCTCTATGCCACAGTGGACTTCGGAGTAGATGCCAACATCACAGCTGCTTTTC TAATGCAGAGGAAGTATGAACCCAGAGGACCCTTGATCAATTCTGAATTCTACACTGGCT GGTTAGACCATTGGGGCCAACCTCACTCGACAGTCAAGACTCAAGTGGTGGCTTCTTTCC TCCACGACATACTTGCCCTTGGTGCAAATGTGAACATGTACCTGCCCG |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 55 entry(ies) | More info |
| Aligned organism(s): 55 entry(ies) | Help | Less info |
| 69-240, gnl|bosTau2|chr22 (11223579-11223407) | |
| 69-240, gnl|canFam2|chr23 (6766966-6766842) | |
| 69-240, gnl|danRer3|chr1 (52020680-52020793) | |
| 69-240, gnl|dasNov1|scaffold_7517 (47931-48045) | |
| 69-240, gnl|echTel1|scaffold_167767 (732-609) | |
| 69-240, gnl|fr1|chrUn (86469356-86469232) | |
| 69-240, gnl|galGal2|chr2 (43542520-43542637) | |
| 69-240, gnl|hg17|chr3 (33085301-33085425) | |
| 69-240, gnl|Hg17|chr3 (33085487-33085315) | |
| 69-240, gnl|loxAfr1|scaffold_11204 (50366-50250) | |
| 69-240, gnl|mm7|chr9 (114071616-114071492) | |
| 69-240, gnl|Mm7|chr9 (114071423-114071600) | |
| 69-240, gnl|monDom2|scaffold_7 (61515643-61515528) | |
| 69-240, gnl|oryCun1|scaffold_161694 (6531-6655) | |
| 69-240, gnl|panTro1|chr2 (34102328-34102452) | |
| 69-240, gnl|rheMac2|chr2 (175555728-175555852) | |
| 69-240, gnl|rn3|chr8 (118829371-118829250) | |
| 69-240, gnl|tetNig1|chr18 (5614301-5614421) | |
| 69-240, gnl|xenTro1|scaffold_26 (1337577-1337465) | |
| 391-569, gnl|bosTau2|chr22 (11214188-11214010) | |
| 391-569, gnl|canFam2|chr23 (6776354-6776122) | |
| 391-569, gnl|danRer3|chr1 (52018342-52018551) | |
| 391-569, gnl|echTel1|scaffold_307518 (644-432) | |
| 391-569, gnl|fr1|chrUn (86470382-86470159) | |
| 391-569, gnl|galGal2|chr2 (43540073-43540305) | |
| 391-569, gnl|hg17|chr3 (33074558-33074790) | |
| 391-569, gnl|Hg17|chr3 (33074770-33074592) | |
| 391-569, gnl|loxAfr1|scaffold_11204 (58702-58469) | |
| 391-569, gnl|mm7|chr9 (114081610-114081386) | |
| 391-569, gnl|Mm7|chr9 (114081404-114081582) | |
| 391-569, gnl|monDom2|scaffold_7 (61527846-61527613) | |
| 391-569, gnl|oryCun1|scaffold_150251 (8741-8923) | |
| 391-569, gnl|panTro1|chr2 (34091613-34091845) | |
| 391-569, gnl|rheMac2|chr2 (175543977-175544209) | |
| 391-569, gnl|rn3|chr8 (118839219-118838999) | |
| 391-569, gnl|tetNig1|chr18 (5613046-5613250) | |
| 391-569, gnl|xenTro1|scaffold_26 (1342656-1342420) | |
| 637-759, gnl|bosTau2|chr22 (11207274-11207152) | |
| 637-759, gnl|canFam2|chr23 (6780387-6780226) | |
| 637-759, gnl|danRer3|chr1 (52016302-52016438) | |
| 637-759, gnl|dasNov1|scaffold_19535 (8862-9015) | |
| 637-759, gnl|echTel1|scaffold_307518 (4114-3961) | |
| 637-759, gnl|fr1|chrUn (86470757-86470628) | |
| 637-759, gnl|galGal2|chr2 (43538401-43538546) | |
| 637-759, gnl|hg17|chr3 (33068373-33068533) | |
| 637-759, gnl|Hg17|chr3 (33068499-33068377) | |
| 637-759, gnl|loxAfr1|scaffold_7751 (99213-99368) | |
| 637-759, gnl|mm7|chr9 (114088964-114088806) | |
| 637-759, gnl|Mm7|chr9 (114088836-114088958) | |
| 637-759, gnl|monDom2|scaffold_7 (61533344-61533199) | |
| 637-759, gnl|oryCun1|scaffold_150251 (8566-8681) | |
| 637-759, gnl|rheMac2|chr2 (175536931-175537091) | |
| 637-759, gnl|rn3|chr8 (118845163-118845005) | |
| 637-759, gnl|tetNig1|chr18 (5612701-5612839) | |
| 637-759, gnl|xenTro1|scaffold_26 (1347622-1347462) |
| Aligned organism(s): 55 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 69-240, gnl|bosTau2|chr22 (11223579-11223407) | |
| 69-240, gnl|canFam2|chr23 (6766966-6766842) | |
| 69-240, gnl|danRer3|chr1 (52020680-52020793) | |
| 69-240, gnl|dasNov1|scaffold_7517 (47931-48045) | |
| 69-240, gnl|echTel1|scaffold_167767 (732-609) | |
| 69-240, gnl|fr1|chrUn (86469356-86469232) | |
| 69-240, gnl|galGal2|chr2 (43542520-43542637) | |
| 69-240, gnl|hg17|chr3 (33085301-33085425) | |
| 69-240, gnl|Hg17|chr3 (33085487-33085315) | |
| 69-240, gnl|loxAfr1|scaffold_11204 (50366-50250) | |
| 69-240, gnl|mm7|chr9 (114071616-114071492) | |
| 69-240, gnl|Mm7|chr9 (114071423-114071600) | |
| 69-240, gnl|monDom2|scaffold_7 (61515643-61515528) | |
| 69-240, gnl|oryCun1|scaffold_161694 (6531-6655) | |
| 69-240, gnl|panTro1|chr2 (34102328-34102452) | |
| 69-240, gnl|rheMac2|chr2 (175555728-175555852) | |
| 69-240, gnl|rn3|chr8 (118829371-118829250) | |
| 69-240, gnl|tetNig1|chr18 (5614301-5614421) | |
| 69-240, gnl|xenTro1|scaffold_26 (1337577-1337465) | |
| 391-569, gnl|bosTau2|chr22 (11214188-11214010) | |
| 391-569, gnl|canFam2|chr23 (6776354-6776122) | |
| 391-569, gnl|danRer3|chr1 (52018342-52018551) | |
| 391-569, gnl|echTel1|scaffold_307518 (644-432) | |
| 391-569, gnl|fr1|chrUn (86470382-86470159) | |
| 391-569, gnl|galGal2|chr2 (43540073-43540305) | |
| 391-569, gnl|hg17|chr3 (33074558-33074790) | |
| 391-569, gnl|Hg17|chr3 (33074770-33074592) | |
| 391-569, gnl|loxAfr1|scaffold_11204 (58702-58469) | |
| 391-569, gnl|mm7|chr9 (114081610-114081386) | |
| 391-569, gnl|Mm7|chr9 (114081404-114081582) | |
| 391-569, gnl|monDom2|scaffold_7 (61527846-61527613) | |
| 391-569, gnl|oryCun1|scaffold_150251 (8741-8923) | |
| 391-569, gnl|panTro1|chr2 (34091613-34091845) | |
| 391-569, gnl|rheMac2|chr2 (175543977-175544209) | |
| 391-569, gnl|rn3|chr8 (118839219-118838999) | |
| 391-569, gnl|tetNig1|chr18 (5613046-5613250) | |
| 391-569, gnl|xenTro1|scaffold_26 (1342656-1342420) | |
| 637-759, gnl|bosTau2|chr22 (11207274-11207152) | |
| 637-759, gnl|canFam2|chr23 (6780387-6780226) | |
| 637-759, gnl|danRer3|chr1 (52016302-52016438) | |
| 637-759, gnl|dasNov1|scaffold_19535 (8862-9015) | |
| 637-759, gnl|echTel1|scaffold_307518 (4114-3961) | |
| 637-759, gnl|fr1|chrUn (86470757-86470628) | |
| 637-759, gnl|galGal2|chr2 (43538401-43538546) | |
| 637-759, gnl|hg17|chr3 (33068373-33068533) | |
| 637-759, gnl|Hg17|chr3 (33068499-33068377) | |
| 637-759, gnl|loxAfr1|scaffold_7751 (99213-99368) | |
| 637-759, gnl|mm7|chr9 (114088964-114088806) | |
| 637-759, gnl|Mm7|chr9 (114088836-114088958) | |
| 637-759, gnl|monDom2|scaffold_7 (61533344-61533199) | |
| 637-759, gnl|oryCun1|scaffold_150251 (8566-8681) | |
| 637-759, gnl|rheMac2|chr2 (175536931-175537091) | |
| 637-759, gnl|rn3|chr8 (118845163-118845005) | |
| 637-759, gnl|tetNig1|chr18 (5612701-5612839) | |
| 637-759, gnl|xenTro1|scaffold_26 (1347622-1347462) |
| Expressed library(ies): 3 entry(ies) | More info |
| Expressed library(ies): 3 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| nep (0.183925) | |
| csp (0.161186) | |
| ute (0.132784) |