Non-Coding RNA Search

Ss1.1-unkn-TOH602767955.R1.5

Sequence:


               
               CTTCAGCAGATGCCTCCCCAGCTCATGCAGCATGTGGCGCCCCCACCACAGCCACCACAG
CAGCAGCCACAGCCACAACTGCCACCACCACCACAGCAGCCACCACCTCCCAGTCAGCCA
CAGTCTCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAACAA
ATGATGATGATGCTCATGATGCAACAGGACCCCAAATCAGTTAGACTTCCAGTCTCCCAG
AATGTCCATCCCCCAAGGGGTCCCCTGAACCCAGACTCCCAGAGAATGCCCATGCAACAG
AGTGGCAGTGTGCCTGTCATGGTCAGTTTGCAAGGACCTGCCTCCGTGCCACCATCACCT
GATAAACAAAGAATGCCAATGCCTGTGAATACTGCTTTGGGAAATAGTTCAAGGAAAATG
GTATACCAGGAGAACCCCCAGAATCCTTCCAGTTCACCGCTAGGTGAGATGTCCTCGCTC
CCTGAGGCAAGTGGCAGTGAAGTACCATCGGTCTCAGGAGGCCCAAACAGCATGCCTTCA
CATTTAGTAGTCTCCCAGAATCAGTTAATGATGACAGGGCCAAAACCTGGACCATCACCC
CTTTCAGCAACTCAAGGTGCAACTCCCCAGCAACCTCCTGTAAATTCCCTGCCCAGCTCT
CATGGCCACCACTTTCCAAATGTGGCTGCTCCAACCCAAACATCTAGG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CTTCAGCAGATGCCTCCCCAGCTCATGCAGCATGTGGCGCCCCCACCACAGCCACCACAG
CAGCAGCCACAGCCACAACTGCCACCACCACCACAGCAGCCACCACCTCCCAGTCAGCCA
CAGTCTCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAACAA
ATGATGATGATGCTCATGATGCAACAGGACCCCAAATCAGTTAGACTTCCAGTCTCCCAG
AATGTCCATCCCCCAAGGGGTCCCCTGAACCCAGACTCCCAGAGAATGCCCATGCAACAG
AGTGGCAGTGTGCCTGTCATGGTCAGTTTGCAAGGACCTGCCTCCGTGCCACCATCACCT
GATAAACAAAGAATGCCAATGCCTGTGAATACTGCTTTGGGAAATAGTTCAAGGAAAATG
GTATACCAGGAGAACCCCCAGAATCCTTCCAGTTCACCGCTAGGTGAGATGTCCTCGCTC
CCTGAGGCAAGTGGCAGTGAAGTACCATCGGTCTCAGGAGGCCCAAACAGCATGCCTTCA
CATTTAGTAGTCTCCCAGAATCAGTTAATGATGACAGGGCCAAAACCTGGACCATCACCC
CTTTCAGCAACTCAAGGTGCAACTCCCCAGCAACCTCCTGTAAATTCCCTGCCCAGCTCT
CATGGCCACCACTTTCCAAATGTGGCTGCTCCAACCCAAACATCTAGG

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               43-708, gnl|bosTau2|chr13 (46813327-46813989)
               

               
               43-708, gnl|Hg17|chr20 (32794777-32794097)
               

               
               43-708, gnl|Mm7|chr2 (155149279-155148602)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               43-708, gnl|bosTau2|chr13 (46813327-46813989)
               

               
               43-708, gnl|Hg17|chr20 (32794777-32794097)
               

               
               43-708, gnl|Mm7|chr2 (155149279-155148602)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               che (0.136314)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               che (0.136314)

	43-708, gnl\|bosTau2\|chr13 (46813327-46813989)
	43-708, gnl\|Hg17\|chr20 (32794777-32794097)
	43-708, gnl\|Mm7\|chr2 (155149279-155148602)