Ss1.1-unkn-ZM2-47.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| TCGCGATCTAGAACTAGTCGGGGGTAAATCAGTAGCAAATTTAGGTGAAAAATATACAGG TGTTCCTTATTCCCATTTTTATTTTGCACTTTTCTATGAGTTTGAAATAATTTTCAAATA ACAGTATTTTTTAATGGAGTTAGAATAAGGGTTATATATGATAAGTATTTTGGATACTAT TTGATAGAATTTGGTCCTCAGATATGAGCAAAAAAAAAAAATCCCTATATATTGGCCTTA AAATATACCTATTCCCAGGTAACTGTTCTCTTTTTAGTAGGACAGAATTATCTGTTACCA TGACAGACATTCTGAAAACTGTGAGCAATGAACCTGTCAAAATGCACAGCAGAACCAATA ATTCGTCTTAACATTTGTGCACAGGTTGTTAAAATTGCTGCTTAAGAATTAAAAATGAGA TGGATTCTGTCGTTAGGCTCATAGGCAACTTTCTTTTTGTTTTCAGCTTGTGTTTTTTAT TCCATTTTTAGGGAATGTGAAGTATTCTGTAAGAACCATCCTGCGCCATTCTCAAAAGTC ATTACTTTCCACAAGAAGGAACCATTTGAACTAGAAGCATTTTATACTAATTTACATGAA GTGCCTTATCCTGATCCAAGAATTGGGATCTTCACTATTCAGAATGTTTTCCCACAATCT GATGGTGATAGTTCCAAAGTGAAGGTTAAAGTTCGTATTAACATCCATGGAATCTTCAGT GTGGCTAGTGCATCAGTAATTGAGAAGCAAAATGTAGAAGGAGATCACAGTGATATTCCT ATGGAGACAGAAACTTCTTTTAAGAATGAAAGCAAAGATGATGTGGATAAAATGCAGGTT GACCAAGAAGAAGGAGGTCATCAAAAATGTCATGCTGAACATACTCCAGAAGAAGAAATT GATCATACAGGCACCAAATCAAAGTCTGCTCCTTCAGATAAACCAGAGCGATTAAACCAG ACCATTAAAAAAGGAAAAGTCAAGAGTATTGATCTACCTATCCAGAGTAGCCTGTGTAGA CAACTGGGCCAAGATCTTCTCAATAGCTACATTGAAAATGAGGGGAAGATGATAATGCAG GATAAGTTAGAGAAGGAAAGAAATGATGCAAAGAATGCTGTTGAAGAATATGTATATGAT TTTAGAGATAAGCTTGGCACTGTCTATGAAAAATTCATCACTCAAGAAGACTTGAATAAA CTGTCAGCAATATTGGAAGACACAGAAAACTGGCTTTATGAAGAAGGAGANGACCACCTA AACCAATTTATG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| TCGCGATCTAGAACTAGTCGGGGGTAAATCAGTAGCAAATTTAGGTGAAAAATATACAGG TGTTCCTTATTCCCATTTTTATTTTGCACTTTTCTATGAGTTTGAAATAATTTTCAAATA ACAGTATTTTTTAATGGAGTTAGAATAAGGGTTATATATGATAAGTATTTTGGATACTAT TTGATAGAATTTGGTCCTCAGATATGAGCAAAAAAAAAAAATCCCTATATATTGGCCTTA AAATATACCTATTCCCAGGTAACTGTTCTCTTTTTAGTAGGACAGAATTATCTGTTACCA TGACAGACATTCTGAAAACTGTGAGCAATGAACCTGTCAAAATGCACAGCAGAACCAATA ATTCGTCTTAACATTTGTGCACAGGTTGTTAAAATTGCTGCTTAAGAATTAAAAATGAGA TGGATTCTGTCGTTAGGCTCATAGGCAACTTTCTTTTTGTTTTCAGCTTGTGTTTTTTAT TCCATTTTTAGGGAATGTGAAGTATTCTGTAAGAACCATCCTGCGCCATTCTCAAAAGTC ATTACTTTCCACAAGAAGGAACCATTTGAACTAGAAGCATTTTATACTAATTTACATGAA GTGCCTTATCCTGATCCAAGAATTGGGATCTTCACTATTCAGAATGTTTTCCCACAATCT GATGGTGATAGTTCCAAAGTGAAGGTTAAAGTTCGTATTAACATCCATGGAATCTTCAGT GTGGCTAGTGCATCAGTAATTGAGAAGCAAAATGTAGAAGGAGATCACAGTGATATTCCT ATGGAGACAGAAACTTCTTTTAAGAATGAAAGCAAAGATGATGTGGATAAAATGCAGGTT GACCAAGAAGAAGGAGGTCATCAAAAATGTCATGCTGAACATACTCCAGAAGAAGAAATT GATCATACAGGCACCAAATCAAAGTCTGCTCCTTCAGATAAACCAGAGCGATTAAACCAG ACCATTAAAAAAGGAAAAGTCAAGAGTATTGATCTACCTATCCAGAGTAGCCTGTGTAGA CAACTGGGCCAAGATCTTCTCAATAGCTACATTGAAAATGAGGGGAAGATGATAATGCAG GATAAGTTAGAGAAGGAAAGAAATGATGCAAAGAATGCTGTTGAAGAATATGTATATGAT TTTAGAGATAAGCTTGGCACTGTCTATGAAAAATTCATCACTCAAGAAGACTTGAATAAA CTGTCAGCAATATTGGAAGACACAGAAAACTGGCTTTATGAAGAAGGAGANGACCACCTA AACCAATTTATG |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 24 entry(ies) | More info |
| Aligned organism(s): 24 entry(ies) | Help | Less info |
| 21-626, gnl|bosTau2|chr17 (18543285-18543902) | |
| 21-626, gnl|Hg17|chr4 (129086280-129086890) | |
| 21-626, gnl|Mm7|chr3 (40536742-40537296) | |
| 682-826, gnl|bosTau2|chr17 (18545642-18545788) | |
| 682-826, gnl|Hg17|chr4 (129090253-129090397) | |
| 682-826, gnl|Mm7|chr3 (40539254-40539395) | |
| 1061-1189, gnl|bosTau2|chr17 (18554498-18554626) | |
| 1061-1189, gnl|canFam2|chr19 (16119088-16118937) | |
| 1061-1189, gnl|danRer3|chrNA (216186594-216186441) | |
| 1061-1189, gnl|dasNov1|scaffold_140980 (1574-1726) | |
| 1061-1189, gnl|echTel1|scaffold_212205 (9092-8949) | |
| 1061-1189, gnl|fr1|chrUn (69876291-69876442) | |
| 1061-1189, gnl|galGal2|chr4 (34797348-34797494) | |
| 1061-1189, gnl|hg17|chr4 (129101526-129101678) | |
| 1061-1189, gnl|Hg17|chr4 (129101527-129101655) | |
| 1061-1189, gnl|loxAfr1|scaffold_860 (107040-107191) | |
| 1061-1189, gnl|mm7|chr3 (40550877-40551018) | |
| 1061-1189, gnl|Mm7|chr3 (40550878-40551006) | |
| 1061-1189, gnl|monDom2|scaffold_137 (1246431-1246583) | |
| 1061-1189, gnl|oryCun1|scaffold_70194 (971-1125) | |
| 1061-1189, gnl|panTro1|chr3 (145951943-145952095) | |
| 1061-1189, gnl|rheMac2|chr5 (120139699-120139850) | |
| 1061-1189, gnl|rn3|chr2 (127691042-127691183) | |
| 1061-1189, gnl|tetNig1|chr10 (5435090-5434947) |
| Aligned organism(s): 24 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 21-626, gnl|bosTau2|chr17 (18543285-18543902) | |
| 21-626, gnl|Hg17|chr4 (129086280-129086890) | |
| 21-626, gnl|Mm7|chr3 (40536742-40537296) | |
| 682-826, gnl|bosTau2|chr17 (18545642-18545788) | |
| 682-826, gnl|Hg17|chr4 (129090253-129090397) | |
| 682-826, gnl|Mm7|chr3 (40539254-40539395) | |
| 1061-1189, gnl|bosTau2|chr17 (18554498-18554626) | |
| 1061-1189, gnl|canFam2|chr19 (16119088-16118937) | |
| 1061-1189, gnl|danRer3|chrNA (216186594-216186441) | |
| 1061-1189, gnl|dasNov1|scaffold_140980 (1574-1726) | |
| 1061-1189, gnl|echTel1|scaffold_212205 (9092-8949) | |
| 1061-1189, gnl|fr1|chrUn (69876291-69876442) | |
| 1061-1189, gnl|galGal2|chr4 (34797348-34797494) | |
| 1061-1189, gnl|hg17|chr4 (129101526-129101678) | |
| 1061-1189, gnl|Hg17|chr4 (129101527-129101655) | |
| 1061-1189, gnl|loxAfr1|scaffold_860 (107040-107191) | |
| 1061-1189, gnl|mm7|chr3 (40550877-40551018) | |
| 1061-1189, gnl|Mm7|chr3 (40550878-40551006) | |
| 1061-1189, gnl|monDom2|scaffold_137 (1246431-1246583) | |
| 1061-1189, gnl|oryCun1|scaffold_70194 (971-1125) | |
| 1061-1189, gnl|panTro1|chr3 (145951943-145952095) | |
| 1061-1189, gnl|rheMac2|chr5 (120139699-120139850) | |
| 1061-1189, gnl|rn3|chr2 (127691042-127691183) | |
| 1061-1189, gnl|tetNig1|chr10 (5435090-5434947) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| tes (0.207814) |