Non-Coding RNA Search

Ss1.1-unkn-c13g03.5

Sequence:


               
               GCTCTCAGCCCCCAGAATTCACAGCCTTCTTCCAAGTCCTGGTAACCAGGTCTTGCTTCA
AGTGGGTGTCTTTTGAGTTCTAGATGCCTGGAATCAGCTTTCTTAGGACTCTAGAAGGCT
CCGACCTCTGTGCTCACAGAGCTGGGCGCAAAGCTGCCTTTTCTGCAGAGGTGACAGAGG
GCAGGAAACAGCAGTAGAGGTGCTATAGTCTTAGAAGTTGCTGTAACCGCCCTCTTCCAG
GAACCACTATTACAAGATCCTCCACAGAGAAAGCTCAGTTTCTCCACATAAAAAAAAGAC
GTCTATGGACATGTGAGGATAAGAATAAAGATGAAAATCTTTTTGTCCTTTAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GCTCTCAGCCCCCAGAATTCACAGCCTTCTTCCAAGTCCTGGTAACCAGGTCTTGCTTCA
AGTGGGTGTCTTTTGAGTTCTAGATGCCTGGAATCAGCTTTCTTAGGACTCTAGAAGGCT
CCGACCTCTGTGCTCACAGAGCTGGGCGCAAAGCTGCCTTTTCTGCAGAGGTGACAGAGG
GCAGGAAACAGCAGTAGAGGTGCTATAGTCTTAGAAGTTGCTGTAACCGCCCTCTTCCAG
GAACCACTATTACAAGATCCTCCACAGAGAAAGCTCAGTTTCTCCACATAAAAAAAAGAC
GTCTATGGACATGTGAGGATAAGAATAAAGATGAAAATCTTTTTGTCCTTTAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-341, gnl|bosTau2|chr3 (28534808-28535162)
               

               
               1-341, gnl|Hg17|chr1 (111442188-111441845)
               

               
               1-341, gnl|Mm7|chr3 (106318990-106319330)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-341, gnl|bosTau2|chr3 (28534808-28535162)
               

               
               1-341, gnl|Hg17|chr1 (111442188-111441845)
               

               
               1-341, gnl|Mm7|chr3 (106318990-106319330)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               nje (0.16592)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               nje (0.16592)

	1-341, gnl\|bosTau2\|chr3 (28534808-28535162)
	1-341, gnl\|Hg17\|chr1 (111442188-111441845)
	1-341, gnl\|Mm7\|chr3 (106318990-106319330)