Non-Coding RNA Search

nep08c_p4.z1

Sequence:


               
               ATGTCTGGTGAAATTACACATCCACCAAAGAGAATGCTTCCTGCATTATCAAACAAGAAA
TTTTACCTTTTTCATAAGATCAGAGTAGTGGAGACTCCCTTTTTGCTTTGTTTGCAGGCC
TTTGAGCCCCTGGGAGCCCAGACATCATCCACATTCCTTTTGTTTTTGTGATTAATAAGA
GTTCATTTTTTAATTTGTATTTTTATACAACATCCCCCCCAAAAACAACGTGAGTGGGGG
GTAGGTGGGATTTACTTTTAAGAAAGAAAATATGGGTACATTGGAACCAAGGAAACTTAT
TTTCAGAATATTTCTTCTGAATAAGTGCAGTGGCCGAGGCATATGAACAATGTTACATGT
CTTTCAGATTTCCTTGGAGGCTGGAAGGGTTAAACCAGAAGTGCAATCAGTAGGAATTAG
AGAGTGTTGTGTATTTATGTCTGTAAGTTTTTTTGTAAGGAAAGTTGGTTGCAACAAAAT
TTTCTCCCAAATGTGCTATGCATATCTTTAATGAAAGATGACATGTATTTGCACAAAAAT
TCTCAGGCACAGTAAATTATTATAAACTGAAGTAAAACCCAGGTGCTTG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ATGTCTGGTGAAATTACACATCCACCAAAGAGAATGCTTCCTGCATTATCAAACAAGAAA
TTTTACCTTTTTCATAAGATCAGAGTAGTGGAGACTCCCTTTTTGCTTTGTTTGCAGGCC
TTTGAGCCCCTGGGAGCCCAGACATCATCCACATTCCTTTTGTTTTTGTGATTAATAAGA
GTTCATTTTTTAATTTGTATTTTTATACAACATCCCCCCCAAAAACAACGTGAGTGGGGG
GTAGGTGGGATTTACTTTTAAGAAAGAAAATATGGGTACATTGGAACCAAGGAAACTTAT
TTTCAGAATATTTCTTCTGAATAAGTGCAGTGGCCGAGGCATATGAACAATGTTACATGT
CTTTCAGATTTCCTTGGAGGCTGGAAGGGTTAAACCAGAAGTGCAATCAGTAGGAATTAG
AGAGTGTTGTGTATTTATGTCTGTAAGTTTTTTTGTAAGGAAAGTTGGTTGCAACAAAAT
TTTCTCCCAAATGTGCTATGCATATCTTTAATGAAAGATGACATGTATTTGCACAAAAAT
TCTCAGGCACAGTAAATTATTATAAACTGAAGTAAAACCCAGGTGCTTG

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               3-589, gnl|bosTau2|chr2 (52479565-52478973)
               

               
               3-589, gnl|Hg17|chr2 (202070267-202069675)
               

               
               3-589, gnl|Mm7|chr1 (59154128-59153557)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               3-589, gnl|bosTau2|chr2 (52479565-52478973)
               

               
               3-589, gnl|Hg17|chr2 (202070267-202069675)
               

               
               3-589, gnl|Mm7|chr1 (59154128-59153557)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               nep (0.183925)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               nep (0.183925)

	3-589, gnl\|bosTau2\|chr2 (52479565-52478973)
	3-589, gnl\|Hg17\|chr2 (202070267-202069675)
	3-589, gnl\|Mm7\|chr1 (59154128-59153557)