Non-Coding RNA Search

nep33c_b21.z1

Sequence:


               
               TGTTTTTGAGAGCAGGGACCTGGGGTCCCCCAGAAGGACGAGGATCTAGGTAATGAGGAT
GGAGTGGGAACTTAGGGCCACTCTCCAAACCCCCCCAGATTCACGTTTGCCAGCTCTTGG
CCTTCCGCAGGTGTGAACACCCAACTTCCTTCACATCTGTCGCCTTTTCTACTCACACCG
CCTTTCCTACCTATAGTAACACTGATTCTATTCACCACTGCTCCATCTCACCCCTGTGTG
CCAGCCCTACCCCTCTCTCTTCCACGTGTGTGTTCACACCCAGGCTCCCTCTTCCACGTG
TGTCCACACCTCAGTCTACACAACTGGGTGGCCAGACGTTGTGGAAGGGCGCCAGTTGGC
CAGGGCGGGTCGGGGGAGCGAGAGGGTGGGAGTGGGTGAGCCTGGCGGCCCCTTCTTCAA
CCACCTCAACCCCTGAAGGCCCCGCGGTGGAGGCAGCCTTGTGCCGGGCGGTGCTGGCGC
CGCTGAAGCCAGCCCTGTGGACTCGACTCCGCAGGCTTCGCGCCCCAGAGCTGCGGCAAC
TGCGAAGGCGACAACTGGCTCTGCGCGCGGAGGCGGGG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TGTTTTTGAGAGCAGGGACCTGGGGTCCCCCAGAAGGACGAGGATCTAGGTAATGAGGAT
GGAGTGGGAACTTAGGGCCACTCTCCAAACCCCCCCAGATTCACGTTTGCCAGCTCTTGG
CCTTCCGCAGGTGTGAACACCCAACTTCCTTCACATCTGTCGCCTTTTCTACTCACACCG
CCTTTCCTACCTATAGTAACACTGATTCTATTCACCACTGCTCCATCTCACCCCTGTGTG
CCAGCCCTACCCCTCTCTCTTCCACGTGTGTGTTCACACCCAGGCTCCCTCTTCCACGTG
TGTCCACACCTCAGTCTACACAACTGGGTGGCCAGACGTTGTGGAAGGGCGCCAGTTGGC
CAGGGCGGGTCGGGGGAGCGAGAGGGTGGGAGTGGGTGAGCCTGGCGGCCCCTTCTTCAA
CCACCTCAACCCCTGAAGGCCCCGCGGTGGAGGCAGCCTTGTGCCGGGCGGTGCTGGCGC
CGCTGAAGCCAGCCCTGTGGACTCGACTCCGCAGGCTTCGCGCCCCAGAGCTGCGGCAAC
TGCGAAGGCGACAACTGGCTCTGCGCGCGGAGGCGGGG

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-578, gnl|bosTau2|chr18 (42155434-42156025)
               

               
               1-578, gnl|Hg17|chr19 (44053099-44052601)
               

               
               1-578, gnl|Mm7|chr7 (25730504-25730987)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-578, gnl|bosTau2|chr18 (42155434-42156025)
               

               
               1-578, gnl|Hg17|chr19 (44053099-44052601)
               

               
               1-578, gnl|Mm7|chr7 (25730504-25730987)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               nep (0.183925)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               nep (0.183925)

	1-578, gnl\|bosTau2\|chr18 (42155434-42156025)
	1-578, gnl\|Hg17\|chr19 (44053099-44052601)
	1-578, gnl\|Mm7\|chr7 (25730504-25730987)