Non-Coding RNA Search

pigcb_1678.z1

Sequence:


               
               ACGCTCTGCAAGGCAGCGTGAGCTCTTGCCAGGCCCACAGCCTCGCCAGCCTGGCCAAGA
CCTGGTCGCTCGGGGGCTCCAGGCGCCAGGAGCCCAGCCCCGAAACTGAGGACAGCGAGG
GGGTCCTGCTCATTGAGAAACTCAAGCCGGTGGATTATGAGTACCGAGAGGAGGTCCACT
GGGCCACGCGCCAGCCCTGCCTGGGCAGGGGCGCCTTCGGAGAGGTCCACAGGATGGAGG
ACAAGCAGACCGGCTTCCAGTGTGCCGTCAAAAAGGTTCGAGTCGACGTCTTTCGGGCAG
AGGAGTTGATGGCGTGTGCGGGATTGACATCACCCCGAATCGTCCCTTTGTATGGAGCTG
TGAAAGAAGGGCCTTGGGTCAAAATCTTCATGGAGCTGCTAGAAGGTGGCTCGCTGGGCC
A

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ACGCTCTGCAAGGCAGCGTGAGCTCTTGCCAGGCCCACAGCCTCGCCAGCCTGGCCAAGA
CCTGGTCGCTCGGGGGCTCCAGGCGCCAGGAGCCCAGCCCCGAAACTGAGGACAGCGAGG
GGGTCCTGCTCATTGAGAAACTCAAGCCGGTGGATTATGAGTACCGAGAGGAGGTCCACT
GGGCCACGCGCCAGCCCTGCCTGGGCAGGGGCGCCTTCGGAGAGGTCCACAGGATGGAGG
ACAAGCAGACCGGCTTCCAGTGTGCCGTCAAAAAGGTTCGAGTCGACGTCTTTCGGGCAG
AGGAGTTGATGGCGTGTGCGGGATTGACATCACCCCGAATCGTCCCTTTGTATGGAGCTG
TGAAAGAAGGGCCTTGGGTCAAAATCTTCATGGAGCTGCTAGAAGGTGGCTCGCTGGGCC
A

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               124-277, gnl|bosTau2|chr19 (37091901-37092055)
               

               
               124-277, gnl|Hg17|chr17 (40718114-40717960)
               

               
               124-277, gnl|Mm7|chr11 (103346695-103346537)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               124-277, gnl|bosTau2|chr19 (37091901-37092055)
               

               
               124-277, gnl|Hg17|chr17 (40718114-40717960)
               

               
               124-277, gnl|Mm7|chr11 (103346695-103346537)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               cty (0.10408)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cty (0.10408)

	124-277, gnl\|bosTau2\|chr19 (37091901-37092055)
	124-277, gnl\|Hg17\|chr17 (40718114-40717960)
	124-277, gnl\|Mm7\|chr11 (103346695-103346537)