Non-Coding RNA Search

pigcb_1839.z1

Sequence:


               
               TTTTTTTTTTTTTTTTTTAGCATCCCAGAGGCAACTGTATTGTGCTAAAGCATATACAAA
TTAAGGCTTTACCCTGGTACATAACAATTTCGAAATTAAGTGGGAACATTCCCAACAAAT
CATTCACACAGAATTCAAGCAATCTGTTCAAGAATTAGTTGTGGGGCTCACTTCAAACAA
GTTACTTTGCATCTTACATTCAATGTACGCCACTTAGCTGCTGTAATGAGTGTCACTGTA
ACCTCACTGAAATACCACCCATGATGTTAAGAATTCAAGCCAGTCCAAGGGCAGA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTTTTTTTTTTTTTTTTTAGCATCCCAGAGGCAACTGTATTGTGCTAAAGCATATACAAA
TTAAGGCTTTACCCTGGTACATAACAATTTCGAAATTAAGTGGGAACATTCCCAACAAAT
CATTCACACAGAATTCAAGCAATCTGTTCAAGAATTAGTTGTGGGGCTCACTTCAAACAA
GTTACTTTGCATCTTACATTCAATGTACGCCACTTAGCTGCTGTAATGAGTGTCACTGTA
ACCTCACTGAAATACCACCCATGATGTTAAGAATTCAAGCCAGTCCAAGGGCAGA

Aligned organism(s): 9 entry(ies)

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Aligned organism(s): 9 entry(ies)

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               19-294, gnl|bosTau2|chr5 (18356266-18356531)
               

               
               19-294, gnl|canFam2|chr3 (15105517-15105991)
               

               
               19-294, gnl|hg17|chr11 (61646982-61647479)
               

               
               19-294, gnl|Hg17|chr12 (94411397-94411112)
               

               
               19-294, gnl|loxAfr1|scaffold_16785 (53785-53294)
               

               
               19-294, gnl|Mm7|chr10 (93419133-93419392)
               

               
               19-294, gnl|oryCun1|scaffold_181989 (3979-3623)
               

               
               19-294, gnl|panTro1|chr9 (62626430-62626926)
               

               
               19-294, gnl|rheMac2|chr14 (11934891-11934399)

Aligned organism(s): 9 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               19-294, gnl|bosTau2|chr5 (18356266-18356531)
               

               
               19-294, gnl|canFam2|chr3 (15105517-15105991)
               

               
               19-294, gnl|hg17|chr11 (61646982-61647479)
               

               
               19-294, gnl|Hg17|chr12 (94411397-94411112)
               

               
               19-294, gnl|loxAfr1|scaffold_16785 (53785-53294)
               

               
               19-294, gnl|Mm7|chr10 (93419133-93419392)
               

               
               19-294, gnl|oryCun1|scaffold_181989 (3979-3623)
               

               
               19-294, gnl|panTro1|chr9 (62626430-62626926)
               

               
               19-294, gnl|rheMac2|chr14 (11934891-11934399)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               cty (0.10408)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cty (0.10408)

	19-294, gnl\|bosTau2\|chr5 (18356266-18356531)
	19-294, gnl\|canFam2\|chr3 (15105517-15105991)
	19-294, gnl\|hg17\|chr11 (61646982-61647479)
	19-294, gnl\|Hg17\|chr12 (94411397-94411112)
	19-294, gnl\|loxAfr1\|scaffold_16785 (53785-53294)
	19-294, gnl\|Mm7\|chr10 (93419133-93419392)
	19-294, gnl\|oryCun1\|scaffold_181989 (3979-3623)
	19-294, gnl\|panTro1\|chr9 (62626430-62626926)
	19-294, gnl\|rheMac2\|chr14 (11934891-11934399)